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. 2020 Aug 5;8:701. doi: 10.3389/fbioe.2020.00701

Table 3.

Comparison of CNA_origin predictions with those of other algorithms.

Cancer Predictor Precision Recall F1-score
BRCA CNA_origin 0.8750 0.9231 0.8984
LSTM 0.8713 0.8462 0.8585
RF 0.8556 0.8645 0.8601
XGboost 0.8214 0.8846 0.8519
CNA_zhang 0.7916 0.8735 0.8306
COADREAD CNA_origin 0.8158 0.7381 0.7750
LSTM 0.8571 0.8077 0.8317
RF 0.7659 0.6923 0.7272
XGboost 0.7959 0.7500 0.7723
CNA_zhang 0.6000 0.7346 0.6605
GBM CNA_origin 0.9310 0.8438 0.8852
LSTM 0.8913 0.8913 0.8913
RF 0.8627 0.8627 0.8627
XGboost 0.9535 0.8913 0.9213
CNA_zhang 0.8870 0.8593 0.8730
KIRC CNA_origin 0.8889 0.9600 0.9231
LSTM 0.8837 0.9268 0.9048
RF 0.9056 0.8571 0.8807
XGboost 0.8780 0.8780 0.8780
CNA_zhang 0.8085 0.9268 0.8636
OV CNA_origin 0.8980 0.8627 0.8800
LSTM 0.7843 0.9091 0.8421
RF 0.7826 0.9000 0.8372
XGboost 0.7551 0.8409 0.7957
CNA_zhang 0.8461 0.7586 0.8000
UCEC CNA_origin 0.6792 0.7200 0.6990
LSTM 0.6897 0.6557 0.6723
RF 0.6451 0.6060 0.6250
XGboost 0.7407 0.6557 0.6957
CNA_zhang 0.7419 0.4693 0.5750

The bold values are the best performance among counterparts.