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. 2020 Jul 31;16(7):e1008104. doi: 10.1371/journal.pcbi.1008104

Fig 2. Oxford Grid of pairwise alignments generated using LAST, with x-axis representing the reference Plataus+PacBio assembly contigs and the y-axis representing the various assembly scaffolds filtered to 200bp.

Fig 2

Forward and reverse alignments are denoted with a red and blue dot, respectively. Percent missing is denoted with m and percent duplicated/expanded is denoted as d. A. reference assembly vs. itself. B. SOAPdenovo2 k-mer 23. C. SOAPdenovo2 k-mer 47. D. SOAPdenovo2 k-mer 63. E. Platanus step-size 1. F. Platanus step-size 3. G. Platanus step-size 5. H. Platanus step-size 7. I. Platanus step-size 10. J. Platanus step-size 15. K. Platanus step-size 20. L. Platanus step-size 30.