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. 2020 Jul 22;16(7):e1007553. doi: 10.1371/journal.pcbi.1007553

Fig 1. Diagram summarizing the different steps of the pipeline to generate the LSH Forest and hash signatures for each HOG.

Fig 1

The labelled phylogenetic trees generated by pyHam are converted into phylogenetic profiles and used to generate a weighted MinHash signature with Datasketch. The hash signatures are inserted into the LSH Forest and stored in an HDF5 file.