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. 2020 Aug 7;12:7061–7075. doi: 10.2147/CMAR.S260150

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© 2020 Ma et al.

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Identification of Differentially Expressed Genes (DEGs). Volcano map of differently expressed lncRNAs, miRNAs and mRNAs between TNBC and non-TNBC samples. Red spots represent upregulated genes, and blue spots represent downregulated genes. (A) 2,277 DEmRNAs (1,042 upregulated and 1,235 downregulated) in TCGA TNBC cohorts; (B) 1,717 DEmRNAs (1,111 upregulated and 606 downregulated) in GSE38959 TNBC cohorts; (C) 3,461 DEmRNAs (2,464 upregulated and 997 downregulated) in GSE45827 TNBC cohorts; (D) 3,499 DEmRNAs (2,475 upregulated and 1,024 downregulated) in GSE65194 TNBC cohorts; (E) Venn diagrams represent the intersections of differentially expressed genes and 282 DEmRNAs were identified amongst four datasets above; (F) 1,045 DElncRNAs (437 upregulated and 608 downregulated) in TCGA TNBC cohorts; (G) 28 DEmiRNAs (15 upregulated and 13 downregulated) in TCGA TNBC cohorts.