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. 2020 Jul 8;17(168):20200360. doi: 10.1098/rsif.2020.0360

Figure 2.

Figure 2.

Relative error made in the average number of mRNAs (R) and its variance (Rσ) when considering the cell cycle to be deterministic instead of Erlang distributed in a non-proliferating population or a lineage. Panels compare the theoretical results (lines) with stochastic simulations (circles). (a,b) Relative error R of the mean number of mRNA. (c) Genome-wide values of η for three different cell types. NIH3T3 mouse fibroblast data was obtained from [33]. Degradation rates for S. cerevisiae cultured in yeast extract peptone dextrose were obtained from [32] and its cell cycle duration from [34]. Stability data for the transcripts of E. coli cultured in Lysogeny broth were obtained from [31], while its cell cycle duration is taken from [35]. Averages are done over trajectories of duration t = 600Tmax (1/dT, 1/rT, 1). (a,b,f) Averages over 50 trajectories for all conditions except for n^=1, which shows an average of 500 trajectories. (d,e) Averages over 200 trajectories. Error bars indicate the standard error of the mean.