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Phylogenetic tree of 237 M. pneumoniae genomes based on whole-genome SNP analysis. p1, orf6, MLVA, MLST, and SNP-8 types, MR, origin, year of isolation, and GenBank accession nos. of the strains are shown at the right side of the trees. Bootstrap values are indicated at the branches. (A) Phylogenetic tree of 136 genome data of p1 type 1 lineage strains. (B) Phylogenetic tree of 101 genomes of p1 type 2 lineage strains. Magnifications of the trees are shown in Supplementary Figure 5.
