Table 2.
Recurrent regions of loss in ES cell lines, showing loss in EC primary/cell lines.
Cytoband | Cell line | Start (bp) | End (bp) | Segment size (bp) | Mean Log R ratio | Detected in EC cell lines | Detected in primary ECs |
---|---|---|---|---|---|---|---|
2q37.3 | H7 | 242,915,466 | 243,034,686 | 119,220 | −0.61 | ||
H14 | 242,915,466 | 243,089,456 | 173,990 | −0.49 | 2/5 | 1/13 | |
Shef6 | 242,915,466 | 243,089,456 | 173,990 | −0.49 | |||
1q21.3 | H7 | 152,759,678 | 152,768,700 | 9022 | −1.46 | 2/5 | 5/13 |
Shef6 | 152,759,678 | 152,768,700 | 9022 | −1.38 | |||
3q22.1 | Shef6 | 129,766,586 | 129,806,236 | 39,650 | −0.96 | 3/5 | 3/13 |
Shef7 | 129,763,698 | 129,806,236 | 42,538 | −0.70 | |||
6q16.1 | H7 | 95,452,264 | 95,533,338 | 81,074 | −0.75 | 3/5 | 0/13 |
H14 | 95,442,761 | 95,533,338 | 90,577 | −0.80 | |||
8p21.2 | H7 | 24,974,476 | 24,984,333 | 9857 | −1.12 | 4/5 | 4/13 |
H14 | 24,974,522 | 24,984,333 | 9811 | −1.34 |