Table 3.
Allele-specific LOH identified in primary ECs.
Cytoband | Samples with LOH | Start (bp) | End (bp) | Segment size (bp) | Genes in region |
---|---|---|---|---|---|
4q21.21 | 10 | 80,576,187 | 81,079,422 | 503,235 | ANTXR2 |
4q33-q34.1 | 10 | 171,243,266 | 172,739,515 | 1,496,249 | GALNTL6 |
9q34.2 | 9 | 136,642,066 | 136,992,038 | 349,972 | BRD3, BRD3OS, VAV2 |
18q12.1 | 9 | 25,987,834 | 26,905,128 | 917,294 | - |
Focal regions of LOH identified by ASCAT in primary ECs with corresponding genes located in the region.