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. 2020 Mar 5;95:381–414. doi: 10.1016/j.simyco.2020.02.004

Table 1.

Details of the sooty mould isolates included in this study. Type cultures and sequences generated in this study are in bold face.

Family and Species name Voucher/Culture1 Substrate/Lifestyle2 Country/Location Collector GenBank accession numbers3
LSU ITS TEF-1α RPB2
Capnodiaceae
Capnodium alfenasii CBS 146151 = CPC 22666 Tabebuia sp. Brazil A.C. Alfenas MN749165 MN749233 MN829346 MN829260
CBS 146152 = CPC 22667 Tabebuia sp. Brazil A.C. Alfenas MN749166 MN749234 MN829347 MN829261
Ca. blackwelliae CBS 133588 = CPC 14327 Myrtus communis USA P.W. Crous MH878118 MN749235 GU349054 GU371743
Ca. coartatum MFLUCC10-0069 Psidium sp. Thailand P. Chomnunti JN832614 – – –
MFLUCC10-0070 – Thailand P. Chomnunti JN832615 – – –
CPC 17779 Alstonia scholaris Thailand K.D. Hyde MN749167 MN749236 MN829348 MN829262
Ca. coffeae CBS 147.52 = AFTOL-ID 939 Coffea robusta Zaire Deposited by J. Nicot/Isolated by A. Saccas GU214400 DQ491515 DQ471089 KT216519
Ca. coffeicola MFLUCC15-0206 Coffea sp. Thailand S. Hongsanan KU358920 KU358921 – –
Ca. gamsii CBS 892.73 Sooty mould, on unknown leaf Sri Lanka W. Gams GU301847 MN749237 GU349045 GU371736
CBS 146153 = CPC 17765 Lagerstroemia speciosa Thailand K.D. Hyde MN749168 MN749238 MN829349 MN829263
MFLUCC10-0066 – Thailand S.K. Chandranath JN832613 – – –
CBS 146154 = CPC 20466 = MFLUCC12-0101 Lagerstroemia floribunda Thailand S. Hongsanan MN749169 MN749239 MN829350 MN829264
CBS 146155 = CPC 20467 = MFLUCC12-0102 Lagerstroemia floribunda Thailand S. Hongsanan MN749170 MN749240 MN829351 MN829265
CBS 146156 = CPC 20471 = MFLUCC12-0107 Living leaf of unknown host Thailand S. Hongsanan MN749171 MN749241 MN829352 MN829266
Ca. neocoffeicola CBS 139614 = MFLUCC14-0570 Coffea arabica Thailand S. Hongsanan MN749172 MN749242 MN829353 MN829267
CBS 139613 = MFLUCC14-0569 Coffea arabica Thailand S. Hongsanan MN749173 MN749243 MN829354 MN829268
Ca. paracoffeicola CBS 139616 = MFLUCC 14-0572 Coffea arabica Thailand S. Hongsanan MN749174 MN749244 MN829355 MN829269
CBS 139615 = MFLUCC14-0571 Coffea arabica Thailand S. Hongsanan MN749175 MN749245 MN829356 MN829270
Chaetocapnodium indonesiacum CBS 202.30 Camelia sinensis Indonesia Deposited by F.H. van Beyma/Isolated by Steinmann GU301849 MH855113 GU349060 MN829273
Ch. insulare CBS 146159 = CPC 19221 Phylica arborea South Africa M.J. Wingfield MN749178 MN749248 MN829359 MN829274
CBS 146160 = CPC 19223 Phylica arborea South Africa M.J. Wingfield MN749179 MN749249 MN829360 MN829275
CBS 146161 = CPC 19224 Phylica arborea South Africa M.J. Wingfield MN749180 MN749250 MN829361 MN829276
Ch. philippinense MFLUCC12-0110 = CPC 20474 Palm Philippines K.D. Hyde KP744503 MN749251 MN829362 MN829277
Ch. placitae CBS 124758 = CPC 13706 Eucalyptus placita Australia B.A. Summerell GQ303299 GQ303268 MN829363 MN829278
Ch. siamensis MFLUCC13-0778 Leaves of unidentified plant Thailand S. Hongsanan KP744479 – – –
CBS 139815 = MFLUCC13-0096 Leaves of unidentified plant Thailand S.C. Karunarathna MN749181 MN749252 MN829364 MN829279
Ch. summerellii CBS 146157 = CPC 13654 Eucalyptus placita Australia B.A. Summerell MN749176 MN749246 MN829357 MN829271
CBS 146158 = CPC 17368 – Laos P. Pheng MN749177 MN749247 MN829358 MN829272
Ch. tanzanicum CBS 145.79 Lichen Tanzania – MN749182 MN749253 MN829365 MN829280
Ch. thailandense CBS 139619 = MFLUCC13-0787 – Thailand S.C. Karunarathna MN749183 MN749254 MN829366 MN829281
Conidiocarpus asiticus MFLUCC10-0062 Coffea arabica Thailand J.K. Liu JN832612 KU358924 – –
Co. caucasicus GUMH 937 Citrus sinensis Iran F. Byrami KC833050 – – –
Co. siamensis MFLUCC10-0064 Mangifera indica Thailand R. Phokhomsak JN832609 – – –
Co. siamensis MFLUCC10-0061 – Thailand P. Chomnunti JN832607 KU358923 – –
Co. siamensis MFLUCC10-0063 Coffea arabica Thailand J.K. Liu JN832608 KU358925 – –
Conidiocarpus sp. CPC 17778 Guave sp. Thailand K.D. Hyde MN749185 MN749256 MN829368 MN829283
CPC 20463 = MFLUCC12-0098 Malus sp. Thailand W. Saowanee MN749187 MN749258 MN829370 MN829285
CPC 20464 = MFLUCC12-0099 Mimusops elengi Thailand S. Hongsanan MN749194 MN749265 MN829377 MN829292
CPC 20465 = MFLUCC12-0100 Mimusops elengi Thailand S. Hongsanan MN749191 MN749262 MN829374 MN829289
CPC 20468 = MFLUCC12-0103 Mango Thailand Puttaluk MN749193 MN749264 MN829376 MN829291
CPC 20472 = MFLUCC12-0108 Living leaf of unknown host Thailand S. Hongsanan MN749188 MN749259 MN829371 MN829286
CPC 21380 = MFLUCC12-0404 Malus sp. Thailand K.D. Hyde MN749186 MN749257 MN829369 MN829284
CBS 139818 = MFLUCC14-0874 Coffea arabica Thailand S. Hongsanan MN749190 MN749261 MN829373 MN829288
CBS 139819 = MFLUCC14-0875 Coffea arabica Thailand S. Hongsanan MN749192 MN749263 MN829375 MN829290
CBS 139820 = MFLUCC 14-0876 Coffea arabica Thailand S. Hongsanan MN749184 MN749255 MN829367 MN829282
CBS 139821 = MFLUCC14-0877 Coffea arabica Thailand S. Hongsanan MN749189 MN749260 MN829372 MN829287
Heteroconium citharexyli HM628775 Citharexylum ilicifolium Ecuador H. Sydow HM628775 HM628776 – –
Leptoxyphium cacuminum MFLUCC10-0059 Gossypium herbaceum Thailand S.C. Karunarathna JN832603 – – –
MFLUCC10-0049 Mimusops elengi Thailand P. Chomnunti JN832602 – – –
MFLUCC10-0086 Ficus sp. Thailand K.D. Hyde JN832604 – – –
L. citri CBS 451.66 Citrus sinensis Spain H.A. van der Aa KF902094 MN749266 GU349039 GU371727
CBS 146162 = CPC 26196 – – V. Guarnaccia MN749195 MN749267 MN829378 MN829294
L. glochidion IFRDCC 2651 Glochidion wrightii China H. Yang KF982308 KF982307 – –
L. kurandae CBS 129530 = CPC 17274 Eucalyptus sp. Australia P.W. Crous & R.G. Shivas JF951170 JF951150 MN829379 MN829295
L. madagascariense CBS 124766 = CPC 14623 Eucalyptus camaldulensis Madagascar M.J. Wingfield MH874923 MH863407 MN829380 MN829296
Leptoxyphium sp. CPC 17767 Gossypium herbaceum Thailand K.D. Hyde MN749203 MN749275 MN829388 MN829304
CPC 20470 = MFLUCC12-0106 Living leaf of unknown host Thailand S. Hongsanan MN749200 MN749272 MN829385 MN829301
CPC 20473 = MFLUCC12-0109 Living leaf of unknown host Thailand S. Hongsanan MN749197 MN749269 MN829382 MN829298
CPC 20481 = MFLUCC12-0118 Living leaf of unknown host Thailand – MN749201 MN749273 MN829386 MN829302
CPC 21382 = MFLUCC12-0406 Heliconia sp. Thailand S. Hongsanan MN749199 MN749271 MN829384 MN829300
CPC 21383 = MFLUCC12-0407 Ixora chinensis Thailand S. Hongsanan MN749202 MN749274 MN829387 MN829303
CBS 123.26 = ATCC 11925 = IMI 089363 Hibiscus tiliaceus Indonesia Deposited by M.B. Schwarz GU214430 MH854862 GU349051 GU371741
CBS 382.87 Citrus aurantium India Deposited and isolated by N.D. Sharma MN749205 MN749277 MN829390 MN829306
CBS 135836 Insect gut India S. Kajale & M. Sonawane MN749206 MN749278 MN829391 MN829307
CBS 139617 = MFLUCC13-0781 – Thailand S. Hongsanan MN749196 MN749268 MN829381 MN829297
CBS 139618 = MFLUCC13-0783 – Thailand S. Hongsanan MN749204 MN749276 MN829389 MN829305
CBS 139620 = MFLUCC13-0786 – Thailand S.C. Karunarathna MN749207 MN749279 MN829392 MN829308
CBS 139812 = MFLUCC13-0078 Living leaf of unknown host Thailand S.C. Karunarathna MN749208 MN749280 MN829393 MN829309
CBS 139814 = MFLUCC13-0790 Living leaf of unknown host Thailand S.C. Karunarathna MN749198 MN749270 MN829383 MN829299
Phragmocapnias betle CPC 17762 Mimusops elengi (Bullet wood) Thailand K.D. Hyde MN749221 MN749293 MN829407 MN829323
CPC 20476 = MFLUCC12-0112 Palm Philippines K.D. Hyde MN749222 MN749294 MN829408 MN829324
CPC 21379 = MFLUCC12-0403 Malus sp. Thailand K.D. Hyde MN749223 MN749295 MN829409 MN829325
MFLUCC10-0053 Ixora sp. Thailand P. Chomnunti JN832606 KU358922 – –
Ph. plumeriae MFLUCC15-0205 Plumeria sp. Thailand C. Singhapop KU358918 KU358919 – –
Polychaeton citri CBS 116435 Citrus aurantium Iran R. Zare & W. Gams GU214469 GU214649 MN829394 MN829310
Neoantennariellaceae
Fumiglobus pieridicola UBC F23788 Pieris japonica Canada Tanay Bose KC833052 KF263961 – –
Neoantennariella phylicae CBS 146164 = CPC 19227 Phyllica arborea South Africa M.J. Wingfield MN749209 MN749281 MN829395 MN829311
CBS 146165 = CPC 19977 Phylica arborea UK P. Ryan MN749213 MN749285 MN829399 MN829315
CBS 146166 = CPC 19981 Phylica arborea UK P. Ryan MN749212 MN749284 MN829398 MN829314
CBS 146167 = CPC 19985 Phylica arborea UK P. Ryan MN749210 MN749282 MN829396 MN829312
CPC 19992 Phylica arborea UK P. Ryan MN749214 MN749286 MN829400 MN829316
CBS 146163 = CPC 19989 Phylica arborea UK P. Ryan MN749211 MN749283 MN829397 MN829313
Neoasbolisia phylicae CBS 146168 = CPC 19982 Phylica arborea UK P. Ryan MN749215 MN749287 MN829401 MN829317
Readerielliopsidaceae
“Capnodium” salicinum CBS 131.34 = AFTOL-ID 937 Bursaria spinosa Indonesia Deposited by E.E. Fisher EU019269 AJ244240 DQ677889 KT216553
Phaeoxyphiella australiana CBS 146169 = CPC 29527 Agonis sp. Australia P.W. Crous MN749220 MN749292 MN829406 MN829322
Ph. phylicae CBS 146171 = CPC 19979 Phylica arborea UK P. Ryan MN749216 MN749288 MN829402 MN829318
CBS 146172 = CPC 19984 Phylica arborea UK P. Ryan MN749217 MN749289 MN829403 MN829319
CBS 146173 = CPC 19987 Phylica arborea UK P. Ryan MN749218 MN749290 MN829404 MN829320
CBS 146170 = CPC 19993 Phylica arborea UK P. Ryan MN749219 MN749291 MN829405 MN829321
Readerielliopsis fuscoporiae CBS 139900 = CPC 24637 Fuscoporia wahlbergii French Guiana C. Decock KR476755 KR476720 MN829410 MN829326
R. guyanensis CBS 117550 = MUCL 46082 Dead, decaying leaf, unidentified angiosperm in leaf litter French Guiana Deposited by C. Decock/Isolated by M.H. de Frahan FJ493211 MH863023 MN829411 MN829327
Scolecoxyphium blechni CBS 146174 = CPC 19990 Blechnum palmiforme UK P. Ryan MN749224 MN749296 MN829412 MN829328
Sc. blechnicola CBS 146175 = CPC 19991 Blechnum palmiforme UK P. Ryan MN749225 MN749297 MN829413 MN829329
Sc. leucadendri CBS 146176 = CPC 18313 Leucadendron sp. South Africa P.W. Crous MN749226 MN749298 MN829414 MN829330
Sc. phylicae CBS 146177 = CPC 19219 Phyllica arborea South Africa M.J. Wingfield MN749227 MN749299 MN829415 MN829331
CBS 146178 = CPC 19225 Phyllica arborea South Africa M.J. Wingfield MN749228 MN749300 MN829416 MN829332
Scorias aphidis CBS 325.33 Aphid – Deposited by L.H. Leonian MH866910 GU214696 MN829417 KT216542
Sc. camelliae CBS 201.30 Camellia sinensis Indonesia Deposited by F.H. van Beyma/Isolated by Steinmann MH866560 MH855112 MN829418 MN829333
Sc. leucadendri CBS 131318 = CPC 18312 Laucadendron muirii South Africa P.W. Crous JQ044456 JQ044437 MN829419 MN829334
CPC 17088 Callistemon sp. Australia P.W. Crous MN749229 MN749301 MN829420 MN829335
Sc. mangiferae MFLUCC15-0230 Mangifera indica Thailand S. Hongsanan KT588603 KT588604 – –
Sc. spongiosa MFLUCC10-0084 Entada sp. Thailand P. Chomnunti JN832601 – – –
Outgroup
Elsinoe phaseoli CBS 165.31 = AFTOL-ID 1855 = IMI 303278 Paseolus lunatus Cuba Deposited by A.E. Jenkins/Isolated by C. Aguiar DQ678095 KX887263 DQ677935 KX887144
Myriangium hispanicum CBS 247.33 Acer monspessulanum – Deposited by J.B. Martínez/Isolated by H. Diddens GU301854 KX887304 GU349055 GU371744
1

ATCC: American Type Culture Collection, Virginia, USA; CBS: Westerdijk Fungal Biodiversity Institute, Utrecht, the Netherlands; CPC: Culture collection of Pedro Crous, housed at Westerdijk Fungal Biodiversity Institute; IFRDCC: International Fungal Research & Development Centre Culture Collection, Chinese Academy of Forestry, Kunming, China; IMI: International Mycological Institute, CABI-Bioscience, Egham, Bakeham Lane, United Kingdom; MFLUCC: Mae Fah Luang University Culture Collection, Chiang Ria, Thailand; MUCL: Université Catholique de Louvain, Louvain-la-Neuve, Belgium.

2

Lifestyle of all sooty mould strains coded as epiphyte.

3

ITS: internal transcribed spacers and intervening 5.8S nrDNA; LSU: partial 28S large subunit RNA gene; TEF-1α: partial translation elongation factor 1-alpha gene; RPB2: partial RNA polymerase II second largest subunit gene. Bold GenBank accession numbers for sequences generated in this study; – indicates unavailable sequence.