Abstract
The newly discovered systematic placement of Bactrodesmium abruptum, the lectotype species of the genus, prompted a re-evaluation of the traditionally broadly conceived genus Bactrodesmium. Fresh material, axenic cultures and new DNA sequence data of five gene regions of six species, i.e. B. abruptum, B. diversum, B. leptopus, B. obovatum, B. pallidum and B. spilomeum, were studied. Bactrodesmium is a strongly resolved lineage in the Savoryellales (Sordariomycetes), supported by Bayesian and Maximum Likelihood methods. The genus Bactrodesmium is emended and delimited to hyphomycetes characterised by sporodochial conidiomata, mononematous often fasciculate conidiophores, holoblastic conidiogenesis and acrogenous, solitary, dry, pigmented, transversely or rarely longitudinally septate conidia. The conidia are seceding rhexolytically, exhibiting multiple secession patterns. An identification key to 35 species accepted in Bactrodesmium is given, providing the most important diagnostic characters. Novel DNA sequence data of B. longisporum and B. stilboideum confirmed their placement in the Sclerococcales (Eurotiomycetes). For other Bactrodesmium, molecular data are available for B. cubense and B. gabretae, which position them in the Dothideomycetes and Leotiomycetes, respectively. All four species are excluded from Bactrodesmium and segregated into new genera, Aphanodesmium, Gamsomyces and Kaseifertia. Classification of 20 other species and varieties not recognised in the genus is discussed. Based on new collections of Dematiosporium aquaticum, the type species of Dematiosporium, the genus is emended to accommodate monodictys-like freshwater lignicolous fungi of the Savoryellales characterised by effuse colonies, holoblastic conidiogenous cells and dictyosporous, pigmented conidia with a pore in each cell. Study of additional new collections, cultures and DNA sequence data revealed several unknown species, which are proposed as taxonomic novelties in the Savoryellales and closely related Pleurotheciales. Ascotaiwania latericolla, Helicoascotaiwania lacustris and Pleurotheciella erumpens are described from terrestrial, lentic and lotic habitats from New Zealand and France, respectively. New combinations are proposed for Helicoascotaiwania farinosa and Neoascotaiwania fusiformis. Relationships and systematics of the Savoryellales are discussed in the light of recent phylogenies and morphological patterns newly linked with the order through cultural studies.
Key words: Conidial secession, Conidiogenesis, Molecular systematics, Sporodochium, Synnema, Wood-inhabiting fungi, 12 taxonomic novelties
Taxonomic novelties: New genus: Aphanodesmium Réblová & Hern.-Restr.; Gamsomyces Hern.-Restr. & Réblová; Kaseifertia Réblová, Hern.-Restr. & J. Fourn
New species: Ascotaiwania latericolla Réblová, Hern.-Restr. & J. Fourn.; Helicoascotaiwania lacustris Réblová & J. Fourn.; Pleurotheciella erumpens Réblová & J. Fourn
New combination: Aphanodesmium gabretae (Koukol & Kolářová) Réblová & Hern.-Restr.; Gamsomyces longisporus (M.B. Ellis) Hern.-Restr. & Réblová; Gamsomyces stilboideus (R.F. Castañeda & G.R.W. Arnold) Hern.-Restr. & Réblová; Helicoascotaiwania farinosa (Linder) Réblová, Hern.-Restr. & J. Fourn.; Kaseifertia cubense (R.F. Castañeda & G.R.W. Arnold) Réblová, Hern.-Restr. & J. Fourn.; Neoascotaiwania fusiformis (Jing Yang, Bhat & K.D. Hyde) Réblová, Hern.-Restr. & J. Fourn
Introduction
Fungi classified in the Pleurotheciales and Savoryellales are non-lichenized perithecial ascomycetes and dematiaceous hyphomycetes with holoblastic conidiogenesis, some of which belong to the life cycle of known sexual morphs (Boonyuen et al., 2011, Réblová et al., 2016a). They are saprobes thriving on decaying wood or plant debris in aquatic and terrestrial habitats. Rarely, some species of the Pleurotheciales were identified as opportunistic human pathogens (Phaeoisaria, Guarro et al., 2000, Chew et al., 2010). Members of both orders share several sexual morphological traits such as the absence of stromatic tissue or clypeus, perithecial ascomata, similar anatomy of the ascomatal wall, thin-walled unitunicate asci with a non-amyloid apical annulus and symmetrical, transversely septate, hyaline or pigmented ascospores with hyaline end cells. However, the main variability between the two groups lies in conidial morphology and conidiogenous cell extension of the known asexual morphs and is characteristic of each order.
The Savoryellales are linked with asexual morphs characterised by sporodochial conidiomata or effuse colonies, mononematous conidiophores and thick-walled, dry, pigmented conidia with transverse and longitudinal septa. They are part of the life cycle of Ascotaiwania, Canalisporium, Dematiosporium, Neoascotaiwania and Savoryella (e.g. Sivichai et al., 1998, Chang, 2001, Boonyuen et al., 2011, Réblová et al., 2016a, Yang et al., 2016, Hernández-Restrepo et al., 2017, Zhang et al., 2019). On the other hand, asexual morphs linked with the Pleurotheciales represent a diverse assemblage of fungi classified in 10 holomorphic or asexually reproducing genera. They produce effuse colonies or rarely sporodochial conidiomata, mononematous or synnematous conidiophores and usually thin-walled, hyaline or pigmented, straight or helicoid, septate, dry or slimy conidia formed mostly on short denticles or rachis on sympodially extending conidiogenous cells (e.g. Fallah et al., 1999, Fernández et al., 1999, Réblová and Seifert, 2011, Réblová et al., 2012, Réblová et al., 2016a, Réblová et al., 2016b, Cheng et al., 2014, Hernández-Restrepo et al., 2017, Luo et al., 2018).
In this study, we focused on Bactrodesmium, an enigmatic and little understood hyphomycete genus whose representative species B. pallidum was linked with the Savoryellales by DNA sequence data (Hernández-Restrepo et al. 2017) and accepted in the broadly delimited Ascotaiwania (Dayarathne et al. 2019). The generic name Bactrodesmium was proposed by Cooke (1883) for dematiaceous hyphomycetes forming sporodochia in the substrate and clavate, transversely septate conidia to accommodate Sporidesmium abruptum (Berkeley & Broome 1865) and Sporidesmium spilomeum (Rabenhorst, Fungi europaei Exs. No. 1162. 1868), but the nomenclatural changes were not made. The designation of B. abruptum as the lectotype species of Bactrodesmium and new combinations were introduced by Hughes (1958). In 1886, Saccardo reduced Bactrodesmium to synonymy with Clasterosporium (Schweinitz 1832), but this treatment was not accepted by subsequent authors (e.g. Ellis, 1959, Zhang et al., 2016). Some unusual elements such as distosepta and also oblique and longitudinal septa in conidia were accepted by Ellis (1976) and Sutton, 1967, Sutton, 1975, Sutton, 1977 to expand the generic concept of Bactrodesmium.
So far, 57 species and varieties have been proposed in Bactrodesmium (Index Fungorum). The genus accommodates species that occur mostly on decaying wood and bark, although some species were also reported from leaves, living (B. mastigophorum) or fallen (e.g. B. peruvianum, B. novaegeronense), or other unusual substrates like paper (B. papyricola) (e.g. Sydow and Sydow, 1920, Moreau and Moreau, 1957, Ellis, 1959, Ellis, 1963, Ellis, 1976, Holubová-Jechová, 1972, Sutton, 1977, Hughes, 1983, Hughes, 1984, Hughes and White, 1983a, Hughes and White, 1983b, Hughes and White, 1983c, Hughes and White, 1983d, Hughes and White, 1983e, Hughes and White, 1983f, Hughes and White, 1983g, Hughes and White, 1983h, Hughes and White, 1983i, Castañeda-Ruiz, 1985). Several morphological traits are highly characteristic for the genus. The sporodochial conidiomata are brown to black, visible as little shining spiky piles or little heaps easily overlooked on the substrate. Rarely, colonies of several species are effuse. Conidiophores of Bactrodesmium are macronematous or semi-macronematous, mononematous, seldom characterised as synnematous. Conidia are formed holoblastically on the conidiogenous cells; they are phragmosporous or dictyosporous, euseptate or distoseptate, sometimes with bands at the transverse septa, subhyaline or have various shades of golden, brown, olive brown to black colour, and some possess distinct pores at the septa. The conidial shape varies from subglobose, pyriform, clavate, obovoid, ellipsoidal, fusiform to cylindrical. The conidium secession of Bactrodesmium has been addressed several times and according to various authors it was considered either rhexolytic (e.g. Ellis, 1963, Ellis, 1976, Palm and Stewart, 1982, Hughes, 1983, Kirk, 1985, Kirk, 1986, Mercado et al., 1995, Hernández-Restrepo et al., 2013) or schizolytic (e.g. Palm and Stewart, 1982, Révay, 1993, Cooper, 2005, Markovskaja, 2006).
The broad delimitation of Bactrodesmium lacks phylogenetic support. In addition to B. pallidum, the published DNA sequence data confirmed the systematic placement of only two other species suggesting a polyphyletic nature of Bactrodesmium. They were assigned to distantly related groups pending nomenclatural changes, namely B. cubense (Castañeda-Ruiz & Arnold 1985) in the Pleosporales (Dothideomycetes) (Tanaka et al. 2015) and B. gabretae in the Helotiales (Leotiomycetes) (Koukol & Kolářová 2010). Hernández-Restrepo et al. (2017) placed several strains of Trichocladium opacum, a species confirmed by Ellis (1959) to be conspecific with Sporidesmium fasciculare (syn. Bactrodesmium fasciculare sensu Mason & Hughes 1953), in the Pleosporales and introduced a new genus Pleotrichocladium. In addition, Funk & Shoemaker (1983) confirmed by experimental studies that B. obliquum var. suttonii (Hughes & White 1983b) is the asexual morph of Stuartella suttonii, currently placed in the Dothideomycetes genera incertae sedis. The life history of other Bactrodesmium remains unknown.
Our extensive sampling in freshwater and terrestrial biotopes in the Czech Republic and France revealed several sporodochial Bactrodesmium species. They were identified with six known species, i.e. B. abruptum, B. diversum, B. leptopus, B. obovatum, B. pallidum and B. spilomeum (Ellis, 1959, Ellis, 1963, Saccardo, 1881a, Hughes and White, 1983a, Hughes and White, 1983c, Hernández-Restrepo et al., 2013), and isolated into the axenic culture. Bactrodesmium stilboideum (Castañeda-Ruiz & Arnold 1985), collected on a submerged twig in Puerto Rico and forming synnemata in culture and in the natural substrate, was compared with morphologically similar B. longisporum (Ellis 1976) from Japan and India, producing both sporodochia and synnemata in terrestrial habitats, while in culture only sporodochia were formed. Hughes (1978) transferred B. longisporum to Stigmina (Mycosphaerellales), but this treatment was not accepted by Rao & de Hoog (1986), who considered it conspecific with B. stilboideum. Mena-Portales & Mercado (1987) regarded Stigmina a correct genus and proposed Stigmina longispora var. stilboidea.
We also collected additional representatives of the Pleurotheciales and Savoryellales such as Dematiosporium aquaticum (Luo et al. 2019) and Neoascotaiwania terrestris (Hernández-Restrepo et al. 2017), which exist only in one exemplar, and three other unknown species. Examination of three collections of D. aquaticum and its axenic culture derived from conidia revealed that the fungus possesses dictyosporous conidia with a germ pore in each cell, diagnostic characters not described in the protologues of the genus and species (Luo et al. 2019). A collection of an undescribed fungus, which features the genus Ascotaiwania (Sivanesan & Chang 1992), was made on decaying wood in New Zealand. A monodictys-like asexual morph was observed in the juxtaposition to the ascomata; however, the axenic culture derived from the ascospores remained sterile. On wood submerged in small artificial lakes in gravel pits were collected specimens of a species highly reminiscent of Helicoascotaiwania hughesii (Fallah et al. 1999). Our samples can be distinguished from the latter species by different anatomy of the ascomatal wall, wider asci and presence of a shallow, refractive apical annulus obscured by a large pulvillus in the ascal apex. Numerous collections made on submerged wood in France belong to a species of Pleurotheciella (Réblová et al. 2012). Pleurotheciella has been experimentally linked with dactylaria-like asexual morphs, but the majority of its species reproduce only asexually. The axenic culture derived from the ascospore isolate yielded sterile mycelium only.
The motivation of this study was to assess the systematic placement of several Bactrodesmium species, including B. abruptum, and other undescribed species with affinity to the Pleurotheciales and Savoryellales. We based our study on morphological and cultivation studies and DNA sequence analyses. Evolutionary relationships of Bactrodesmium and related species were revealed in multigene-based phylogenies of five nuclear ribosomal and protein-coding loci of our isolates and members of four orders, the Conioscyphales, Fuscosporellales, Pleurotheciales and Savoryellales. These orders were recovered as a robust monophylum within the Hypocreomycetidae and characterised by true, partially disintegrating paraphyses, while the rest of the subclass comprises several other types of hamathecial elements (Réblová et al. 2016a). The BLASTn search (Zhang et al. 2000) of nuclear ribosomal sequences of B. longisporum and B. stilboideum indicated that both species are not related to the rest of Bactrodesmium studied, but exhibit affinities with members of the Sclerococcales (Eurotiomycetes). In order to reveal their relationships, we based the phylogenetic analysis on four nuclear ribosomal and protein-coding loci of representatives of this order. In this study, we also investigated relationships of B. gabretae in a multigene phylogenetic analysis employing nuclear ribosomal, mitochondrial and protein-coding loci of seventeen families of the Helotiales.
Materials and methods
Fungal isolates and herbarium specimens
Herbarium specimens were obtained from Royal Botanical Gardens (K, IMI), Kew, United Kingdom, Fungarium of the University of Illinois (ILLS), Illinois Natural History Survey, Champaign, Illinois, USA and Westerdijk Fungal Biodiversity Institute (CBS), Utrecht, the Netherlands. Living cultures of Bactrodesmium longisporum were obtained from CBS. Additional material for this study was collected in the Czech Republic, France, New Zealand, USA and Spain.
Representative strains and ex-type strains are maintained at CBS, Facultat de Medicina de Reus (FMR), Tarragona, Spain, BCCM/MUCL Agro-food & Environmental Fungal Collection (MUCL), Université catholique de Louvain, Louvain, Belgium, CABI-IMI Culture Collection (IMI), CABI Bioscience, Egham, United Kingdom, and International Collection of Microorganisms from Plants (ICMP), Auckland, New Zealand. Holotypes (as dried plant material) and other herbarium material are deposited in the New Zealand Fungarium (PDD), Auckland, New Zealand and the Herbarium of the Institute of Botany (PRA), Czech Academy of Sciences, Průhonice, Czech Republic.
Dead branches and decaying wood removed from trunks lying on the ground were collected in paper bags, transferred to the laboratory and air-dried. Twigs and branches submerged in streams were collected in plastic bags and transported to the laboratory. Sediments were washed off with tap water. Freshwater samples were air-dried, placed in the moist chambers and incubated at a temperature of 20–25 °C (Castañeda-Ruiz et al. 2016) and periodically checked for the development of sporodochia. Isolates examined in this study and their sources are listed in Table 1.
Table 1.
Isolates examined in this study.
Taxon | Source | Substrate and host | Locality |
---|---|---|---|
Ascotaiwania latericolla | ICMP 22739T | on decaying wood | Auckland, New Zealand |
Bactrodesmium abruptum | CBS 145966 | on submerged wood of Robinia pseudoaccacia | Ariège, France |
B. abruptum | CBS 145968 | on submerged wood | Ariège, France |
B. abruptum | CBS 145967 | on submerged wood | Ariège, France |
B. abruptum | CBS 144404 | on submerged wood of Fraxinus excelsior | Ariège, France |
B. diversum | CBS 142448 | on submerged wood of Fraxinus excelsior | Ariège, France |
B. diversum | CBS 142450 | on submerged wood of Fraxinus excelsior | Ariège, France |
B. diversum | CBS 144079 | on submerged wood of Fraxinus excelsior | Ariège, France |
B. diversum | CBS 144401 | on submerged wood of Alnus glutinosa | Ariège, France |
B. diversum | CBS 144080 | on submerged wood of Alnus glutinosa | Ariège, France |
B. diversum | CBS 144081ET, IMI 506813ET | on submerged wood of Fraxinus excelsior | Ariège, France |
B. diversum | CBS 144405 | on submerged wood of Robinia pseudoaccacia | Ariège, France |
B. diversum | CBS 145435 | on submerged wood | Ariège, France |
B. diversum | CBS 145965 | on submerged wood of Robinia pseudoaccacia | Ariège, France |
B. diversum | CBS 145970 | on submerged wood | Ariège, France |
B. diversum | CBS 145969 | on submerged wood | Ariège, France |
B. leptopus | CBS 144542 | on decaying wood of Acer campestre | South Moravia, Czech Republic |
B. obovatum | CBS 144078 | on submerged wood of Fraxinus excelsior | Ariège, France |
B. obovatum | CBS 144077 | on submerged wood of Corylus avellana | Ariège, France |
B. obovatum | CBS 145350 | on submerged wood | Ariège, France |
B. obovatum | CBS 144407 | on decaying wood of Fraxinus excelsior | South Moravia, Czech Republic |
B. pallidum | CBS 142449 | on submerged wood of Fraxinus excelsior | Ariège, France |
B. pallidum | CBS 145349 | on submerged wood of Robinia pseudoaccacia | Ariège, France |
B. spilomeum | CBS 146104 | on submerged wood | Ariège, France |
Dematiosporium aquaticum | CBS 144793 | on submerged wood | Ariège, France |
Gamsomyces longisporus | CBS 118.86 | on decaying branch | Karnataka, India |
G. longisporus | CBS 240.89 | on decaying stem of bamboo | Kyoto, Japan |
G. stilboideus | CBS 146494 | on submerged twig | Puerto Rico |
Helicoascotaiwania lacustris | CBS 145963T, MUCL 56486T | on submerged wood of Populus sp. | Haute-Garonne, France |
H. lacustris | CBS 145964 | on submerged wood of Populus sp. | Haute-Garonne, France |
H. lacustris | CBS 146144 | on submerged wood of Salix atrocinerea | Haute-Garonne, France |
Neoascotaiwania terrestris | CBS 144402 | submerged wood of Fraxinus excelsior | Ariège, France |
Pleurotheciella erumpens | CBS 142447T | on submerged wood of a coniferous tree | Ariège, France |
Remarks: T and ET denotes ex-type and ex-epitype strains.
Morphological characterisation
Morphological characteristics were obtained from fungi growing on the natural substrate and growth media. Descriptions in the keys are based on fungi growing on the natural substrate unless otherwise indicated.
Dried herbarium material was rehydrated with water and examined with an Olympus SZX12 dissecting microscope (Olympus America, Inc., Melville, USA). The sections of the ascomatal wall and centrum material containing asci, ascospores and paraphyses were studied in Melzer’s reagent, 90 % lactic acid, lactophenol with cotton blue, Congo red, toluidin blue or Waterman blue ink. Sporodochia, synnemata, conidiophores and conidia were studied in water and lactic acid, occasionally in Melzer’s reagent. Measurements of asci, ascospores and paraphyses were made in Melzer’s reagent, measurements of conidiophores, conidiogenous cells and conidia were made in water. Means ± standard deviation (SD) based on the minimum of 20–25 measurements are given for dimensions of asci, ascospores and conidia.
Single and multiple ascospore and conidial isolates were obtained from fresh material with the aid of a single-spore isolator (Meopta, Czech Republic). The ascospore and conidium isolates were incubated on water agar or Modified Leonian’s agar (MLA) (Malloch 1981) at a temperature of 20–25 °C and periodically checked for the development of germinating tubes that appeared within 48 h, and later for growth of mycelium and sporulation. Because all strains developed more or less abundant aerial mycelium and all sporulated within the given temperature range, the morphological characterisation of the colonies was carried out at a temperature of 23 °C. Different growth media were selected to cover various sources of carbon, nitrogen and B vitamins for colony description and stimulation of sporulation (Guarro et al., 2012, Crous et al., 2019). Also, MLA was selected to stimulate sporulation and mycelium growth (Malloch 1981) and also for the ability to stimulate the production of pigments in mycelium or diffusing in agar (M. Réblová et al., in preparation).
For comparative purposes and culture characteristics, strains were inoculated in triplicate on five different media: cornmeal dextrose agar (CMD) (17 g of cornmeal agar Oxoid Limited, Hampshire, United Kingdom, 2 g of dextrose, 1 L of distilled water, sterilised for 15 min at 121 °C), malt extract agar (MEA), oatmeal agar (CBSOA) and potato-carrot agar (PCA) (Crous et al. 2019), MLA and oatmeal agar (OA) (modified from Gooding & Lucas 1959; 30 g of oatmeal cooked in 1 L of distilled water for 15–30 min, filtered through the cheesecloth, the filtrate was brought back to volume with distilled water, 15 g of agar, sterilised for 60 min at 121 °C). Descriptions of colonies are based on 2-, 4- and 6-wk-old cultures grown in darkness at 23 °C.
Microscopic observations were made using an Olympus BX51 compound microscope with differential interference contrast (DIC) and phase contrast (PC) illumination. Images of microscopic structures were captured with an Olympus DP70 camera operated by Imaging Software CellˆD (Olympus). Colony photographs were taken using a copy stand and Canon EOS 77D digital camera with Canon EF 100 mm f/2.8L Macro IS USM objective (Canon Europe Ltd., Middlesex, United Kingdom) with daylight spectrum 5 500 K 16W LED lights. All images were processed with Adobe Photoshop CS6 (Adobe Systems, San Jose, USA).
DNA extraction and amplification
Total genomic DNA was extracted from mycelium removed from 3-wk-old cultures grown on MLA using the DNeasy® UltraClean® Microbial Kit (Qiagen GmbH, Germany) following the manufacturer’s protocol for filamentous fungi. All PCR amplifications were carried out in 25 μL volume reactions using Q5 High Fidelity DNA polymerase system/ kit (New England Biolabs Inc., GB) according to manufacturer’s protocol, including Q5 PCR enhancer. Primers used for the amplification of genes and gene regions included: 1) NSSU131/NS24 (Gargas and Taylor, 1992, Kauff and Lutzoni, 2002) and NS1/NS8 (White et al. 1990) for the nuclear small subunit (SSU) 18S ribosomal DNA gene, 2) V9G/LR8 (de Hoog & Gerrits van den Ende 1998, Vilgalys unpublished) for the internal transcribed spacer (ITS) of the nuclear rRNA cistron and a first half (approx. 1 900 bp of the 5′ end) of the nuclear large subunit (LSU) 28S ribosomal DNA gene, 3) fRPB2-5F/fRPB2-7cR (Liu et al. 1999) for segments 5–7 of the second largest subunit of RNA polymerase II (rpb2), and 4) EF1-983F/EF1-2218R (Rehner & Buckley 2005) for the intermediate section of the coding region of the translation elongation factor 1-alpha (tef1-α).
PCR was carried out in a BioRad C1000 thermal cycler (Bio-Rad Laboratories Inc., USA) as following: (SSU) 98 °C for 30 s; 45 cycles of denaturation (98 °C for 20 s), annealing (56 °C for 30 s) and elongation (72 °C for 90 s) and a final extension step at 72 °C for 5 min; (ITS-LSU) 98 °C for 30 s; 40 cycles of denaturation (98 °C for 10 s), annealing (62 °C for 30 s) and elongation (72 °C for 90 s) and a final extension step at 72 °C for 5 min; (rpb2) 98 °C for 30 s; 45 cycles of denaturation (98 °C for 10 s), annealing (58 °C for 15 s) and elongation (72 °C for 30 s) and a final extension step at 72 °C for 2 min, and (tef1-α) 98 °C for 30 s; 40 cycles of denaturation (98 °C for 10 s), annealing (57 °C for 10 s) and elongation (72 °C for 60 s) and a final extension step at 72 °C for 2 min.
Amplicons were purified from agarose gel using NucleoSpin® Gel and PCR Clean-up Kit (Macherey-Nagel GmbH & Co. KG, Germany) following the manufacturer’s instructions, with an elution volume of 25 μL. The DNA concentration was assessed fluorimetrically using Quant-iT PicoGreen dsDNA Assay Kit and Qubit fluorometer (Invitrogen / Thermo Fisher Scientific, USA) to assure required sequencing concentrations adjusted for the length of amplicons/ number of reads required.
Each of the amplicons was sequenced in both directions using the PCR primers and nested primers: ITS5, ITS4, JS1, JS7, JS8, LR7 and LR8 for ITS-LSU (Vilgalys and Hester, 1990, White et al., 1990, Landvik, 1996, Vilgalys unpublished) and NS4, NS5, NSSU1088, NSSU1088R, NSSU897R, NS6 for SSU (White et al., 1990, Kauff and Lutzoni, 2002). Automated sequencing was carried out by Eurofins GATC Biotech Sequencing Service (Cologne, Germany). Raw sequence data were assembled, examined and edited using Sequencher v. 5.4.6 (Gene Codes Corp., Ann Arbor, USA).
GenBank accession numbers for ITS, SSU, LSU, rpb2 and tef1-α sequences generated in this study and previously published homologous sequences of members of the Conioscyphales, Fuscosporellales, Pleurotheciales and Savoryellales (Hypocreomycetidae) retrieved from GenBank (Sayers et al. 2019) are listed in Table 2. The LSU, SSU, the mitochondrial small subunit (mitSSU) 18S rRNA gene and rpb2 sequences of representative species belonging to the Helotiales were obtained from our study (Untereiner et al. 2019) and selected according to Johnston et al. (2019). The closest relatives of B. gabretae (ex-type strain ZK171, LSU: FN561755, Koukol & Kolářová 2010), i.e. Aquapoterium pinicola (ex-type strain ATCC MYA-4213, LSU: EU183121, Raja et al. 2008) and Unguicularia unguiculata (strain NK322, SSU: HG326613, rpb2: HG326614, unpublished), were selected from the top-scoring matches using BLASTn and retrieved from GenBank.
Table 2.
Taxa, isolate information and new sequences determined for this study (in bold) and additional sequences retrieved from GenBank.
Remarks: T and ET denotes ex-type and ex-epitype strains.
Selected markers, alignments and phylogenetic analyses
Five gene markers (ITS, LSU, SSU, rpb2 and tef1-α) were used in combinations to evaluate the evolutionary relationships of studied fungi with members of the four orders of the Hypocreomycetidae (Sordariomycetes) and Sclerococcales (Eurotiomycetes). The ITS gene has been sanctioned the universal DNA barcode for fungi (Schoch et al. 2012). The LSU, SSU, rpb2 and tef1-α markers have been used in concatenated alignments to explore ordinal and supraordinal phylogenetic relationships of Ascomycota (Schoch et al. 2009) including Sordariomycetes (e.g. Zhang et al. 2007) and have a good representation in the Hypocreomycetidae. Besides, rpb2 and tef1-α genes also provide subordinate taxon resolution and have high species resolving power (e.g. Rivera and Seifert, 2011, Stielow et al., 2015, Wang et al., 2019). The mitSSU marker is an additional gene that has been used to resolve the relationships of members of the Helotiales (Han et al., 2014, Untereiner et al., 2019).
ITS, LSU, SSU, rpb2 and tef1-α sequences were aligned manually in BioEdit v. 7.1.8 (Hall 1999); the alignment of mitSSU sequences was generated in MAFFT v. 7 (Katoh & Standley 2013) and corrected manually. Introns and ambiguous regions were excluded from the alignment. Single-locus data sets for members of four orders, including Savoryellales, of the Hypocreomycetidae (ITS: 70 sequences/709 characters including gaps, LSU: 90/1 920, SSU: 70/1 770, rpb2: 62/1 149, tef1-α: 33/1 014), Helotiales (Leotiomycetes) (LSU 69/1 232; SSU: 43/1 797; rpb2: 41/1 156; mitSSU 36/1 987) and Sclerococcales (ITS: 15/490; LSU 21/1 208; SSU: 13/1 727; rpb2: 10/1 137) were assessed for conflicts using the 70 % reciprocal bootstrap criterion (Mason-Gamer & Kellogg 1996). Conflict-free data sets were concatenated into two multi-locus alignments (deposited in TreeBASE 25367) that were subjected to subsequent phylogenetic analyses.
The combined datasets were partitioned into subsets of nucleotide sites, i.e. ITS, LSU, SSU, rpb2, tef1-α and mitSSU, for which we assumed rate heterogeneity. Bayesian Inference (BI) and Maximum Likelihood (ML) analyses were used to estimate phylogenetic relationships and were performed through the CIPRES Science Gateway v. 3.3 (Miller et al. 2010). BI analyses were performed in a likelihood framework as implemented in MrBayes v. 3.2.6 (Huelsenbeck & Ronquist 2001). For the BI approach, MrModeltest2 v. 2.3 (Nylander 2008) was used to infer the appropriate substitution model that would best fit the model of DNA evolution. According to the Akaike information criterion, the SYM+G model was selected for ITS, LSU, SSU and rpb2 partitions, while the GTR model was chosen for the tef1-α partition of the Hypocreomycetidae sequence data set. For all partitions of the Helotiales and Sclerococcales data sets, the GTR+I+G and SYM+G models, respectively, were selected. ML analyses were performed with RAxML-HPC v. 8.2.12 (Stamatakis 2014) with a GTRCAT approximation. Nodal support was determined by non-parametric bootstrapping (BS) with 1 000 replicates. Two Bayesian searches were performed using default parameters. The B-MCMCMC analyses lasted until the average standard deviation of split frequencies was below 0.01 with trees saved every 1 000 generations. The first 25 % of saved trees, representing the burn-in phase of the analysis, were discarded. The remaining trees were used for calculating posterior probabilities (PP) of recovered branches. Obtained trees were viewed in FigTree v. 1.3.1 (Rambaut 2009) and edited in MS PowerPoint.
Results
Phylogenetic analyses
Phylogenetic relationships of B. abruptum, B. diversum, B. leptopus, B. obovatum, B. pallidum and B. spilomeum, and three undescribed species of Ascotaiwania, Helicoascotaiwania and Pleurotheciella were resolved by conducting two analyses of the combined ITS, SSU, LSU, rpb2 and tef1-α sequences with homologous sequences of representatives of four orders (Conioscyphales, Fuscosporellales, Pleurotheciales and Savoryellales) of the Hypocreomycetidae. In total, 86 isolates were studied and divided into two subsets. Evolutionary relationships of B. longisporum and B. stilboideum were assessed in the analysis of the combined ITS, LSU, SSU and rpb2 loci of members of the Sclerococcales. Phylogenetic relationships of B. gabretae were resolved by the study of the combined LSU, SSU, rpb2, and mitSSU sequences of representatives of the Helotiales. Aspergillus fumigatus, Eupenicillium javanicum and Trichocoma paradoxa (Eurotiales), Tolypocladium capitatum and T. japonicum (Hypocreales), Botryotinia fuckeliana and Sclerotinia sclerotiorum (Sclerotiniales) and the new species of Helicoascotaiwania and Pleurotheciella and Melanotrigonum ovale (Pleurotheciales), were used to root the trees and thus served as outgroups.
In order to evaluate identification markers that could serve as barcodes distinguishing among Bactrodesmium species (Savoryellales), ITS, LSU, SSU, rpb2 and tef1-α single-gene sequence data sets of 24 Bactrodesmium strains were analysed by Maximum Likelihood method. The LSU and SSU data sets could not determine relationships of more than two species. The analyses of rpb2 and tef1-α genes confirmed six well-supported species clades, compared to the ITS, which could not sufficiently resolve relationships between B. abruptum and B. obovatum. Bactrodesmium spilomeum was not included in the ITS and LSU analyses; despite several attempts, we could not amplify these genes.
The first phylogenetic analysis was based on the combined ITS-LSU-SSU-rpb2-tef1-α sequences of 86 isolates representing 66 species of four orders of the Hypocreomycetidae. The alignment had 6 562 characters including gaps and 2 986 unique character sites. The ML tree is shown in Fig. 1. Four robust terminal clades were identified as the Conioscyphales (100 % ML BS/1.0 BI PP), Fuscosporellales (100/1.0), Pleurotheciales (91/1.0) and Savoryellales (100/1.0). In the ML analysis, Ascotaiwania is shown monophyletic, but the clade is statistically unsupported; Bactrodesmium and Neoascotaiwania are inferred as strongly supported monophyletic genera. In the BI, the Ascotaiwania clade is paraphyletic. The A. mitriformis and A. uniseptata subclade (0.90) is shown as a sister to Bactrodesmium, while an unsupported lineage including A. lignicola, the new species and A. sawadae is a sister clade to the remaining genera of the Savoryellales. The unknown Helicoascotaiwania is positioned as a sister to H. farinosa in a strongly supported clade (100/1.0), and the unknown Pleurotheciella is nested in the Pleurotheciella lineage (94/1.0). Both fungi are described as new species in the Pleurotheciales.
Fig. 1.
Combined phylogeny using ITS, LSU SSU, rpb2 and tef1-α of selected members of four orders of the Hypocreomycetidae. Species names given in bold are taxonomic novelties, T and ET indicates ex-type strains. An asterisk (∗) indicates branches with ML BS = 100 %, PP values = 1.0. Branch support of nodes ≥70 % ML BS and ≥0.90 PP is indicated above or below branches.
The second analysis of the combined ITS-LSU-SSU-rpb2-tef1-α data set included a reduced set of 48 isolates of the Savoryellales representing 25 species in six genera. The concatenated alignment consisted of 6 435 characters including gaps and 2 294 unique character sites. The ML tree is shown in Fig. 2. The treatment of Ascotaiwania according to Dayarathne et al. (2019) was not confirmed in our analysis, and the genus is shown to be paraphyletic in the ML and BI analyses. Bactrodesmium (89/1.0), including all six species, and Neoascotaiwania (100/1.0) with three species, are resolved as monophyletic, well-supported clades. Ascotaiwania fusiformis is nested within Neoascotaiwania, and a new combination is proposed in the latter genus. The remaining Ascotaiwania form a statistically unsupported clade. The unknown Ascotaiwania with a monodictys-like asexual morph is closely related to A. lignicola. Dematiosporium is positioned in the Savoryellales, unrelated to Ascotaiwania with a monodictys-like asexual morphs; it resides on a single branch as a sister taxon to the strongly supported Canalisporium and Savoryella clade (100/1.0). The tree topologies of the Savoryellales recovered in the first and second analyses are highly similar; the differences lie in the position of B. leptopus and B. spilomeum and grouping of species within the Ascotaiwania clade.
Fig. 2.
Combined phylogeny using ITS, LSU, SSU, rpb2 and tef1-α of members of the Savoryellales. Species names given in bold are taxonomic novelties, T and ET indicates ex-type strains. An asterisk (∗) indicates branches with ML BS = 100 %, PP values = 1.0. Branch support of nodes ≥70 % ML BS and ≥0.90 PP is indicated above or below branches. Morphology of conidia and colonies for individual genera is indicated by icons for phragmoconidium/dictyoconidium and sporodochium/effuse colony.
The third phylogenetic analysis of the combined LSU-SSU-rpb2-mitSSU data set included 67 isolates of members of the Helotiales. The concatenated alignment consisted of 6 172 characters including gaps and 2 304 unique character sites. The ML tree is shown in Fig. 3. 17 families and three incertae sedis lineages were inferred using the four markers. The backbone of both trees from ML and BI analyses is statistically unsupported. Bactrodesmium gabretae is resolved in an incertae sedis lineage as a sister taxon to Aquapoterium pinicola ATCC MYA-4213 and Unguicularia unguiculata NK 322.
Fig. 3.
Combined phylogeny using LSU, SSU, rpb2 and mitSSU of representatives of the Helotiales. The species name given in bold is a taxonomic novelty, T indicates ex-type strains. An asterisk (∗) indicates branches with ML BS = 100 %, PP values = 1.0. Branch support of nodes ≥70 % ML BS and ≥0.90 PP is indicated above or below branches.
In the fourth analysis of the combined ITS-LSU-SSU-rpb2 sequences, we assessed relationships of B. longisporum and B. stilboideum with 18 members of the Sclerococcales. The concatenated alignment consisted of 4 562 characters including gaps and 1 396 unique character sites. The ML and BI trees differed in the position of Pseudosclerococcum golindoi. The ML tree is shown in Fig. 4. The Sclerococcales encompass four genera, namely Cylindroconidiis, Pseudosclerococcum, Rhopalophora, Sclerococcum, and also Fusichalara minuta CBS 709.88 and three strains isolated from the digestive tracts of Neotropical wood-inhabiting beetles. Three strains of B. longisporum and B. stilboideum formed a strongly supported lineage (100/1.0), which was introduced as a new genus below.
Fig. 4.
Combined phylogeny using ITS, LSU, SSU and rpb2 of representatives of the Sclerococcales. Species names given in bold are taxonomic novelties, T indicates ex-type strains. An asterisk (∗) indicates branches with ML BS = 100 %, PP values = 1.0. Branch support of nodes ≥70 % ML BS and ≥0.90 PP is indicated above or below branches.
Taxonomy
Bactrodesmium Cooke, Grevillea 12(61): 35. 1883. Emend. Réblová, Hern.-Restr. & J. Fourn.
Type species: Bactrodesmium abruptum (Berk. & Broome) E.W. Mason & S. Hughes, Can. J. Bot. 36: 738. 1958.
Emended description: Asexual morph: Conidiomata sporodochial, superficial, brown to black, scattered or clustered, shining, punctiform, pulvinate, ellipsoidal, elongate or irregular in outline, sometimes confluent. Mycelium mostly immersed, composed of septate, subhyaline to pale brown, compacted hyphae forming partly immersed or superficial pseudostromata. Conidiophores mononematous, macronematous to semi-macronematous, simple or sparsely or penicillately branched, sometimes monilioid composed of inflated cells, often fasciculate, growing from the basal hyphae, hyaline and thin-walled, sometimes brown to dark brown or reddish-brown and thick-walled. Conidiogenous cells terminal, integrated, often intercalary in vitro, holoblastic, mono- or polyblastic, rarely sympodially elongating, hyaline to subhyaline, conidial secession rhexolytic. Conidia acrogenous, solitary, dry, subglobose, clavate, pyriform, ellipsoidal, obovoid, fusiform or cylindrical, euseptate, sometimes with longitudinal or oblique septa, transverse septa sometimes banded, thickly or faintly, usually smooth-walled, pale to dark brown, olivaceous brown, golden-brown, reddish-brown or nearly black, often with a conspicuous thickening at each septum. Sexual morph: unknown.
Habitat and distribution: Saprobes on decaying wood and bark of deciduous and coniferous trees, rarely on fallen leaves or dead palm rachis in terrestrial and freshwater habitats in temperate, subtropical and tropical regions of Southern and Northern Hemispheres (e.g. Ellis, 1959, Ellis, 1963, Holubová-Jechová, 1972, Sutton, 1977, Hughes, 1983, Hughes and White, 1983a, Hughes and White, 1983b, Hughes and White, 1983c, Hughes and White, 1983d, Hughes and White, 1983e, Hughes and White, 1983f, Hughes and White, 1983g, Hughes and White, 1983h, Rao, 1983, Castañeda-Ruiz, 1985, Kirk, 1985, Matsushima and Matsushima, 1995, Mercado et al., 1995, Cooper, 2005).
Notes: Six species of Bactrodesmium, including B. abruptum, form a well-resolved monophylum nested in the Savoryellales in the combined five-gene phylogenies (Fig. 1, Fig. 2). The present taxonomic treatment of Bactrodesmium emphasises the formation of sporodochial conidiomata vs effuse colonies on the natural substrate, mononematous vs synnematous conidiophores and euseptate vs distoseptate conidia following the evidence provided by DNA sequence data (Koukol and Kolářová, 2010, Tanaka et al., 2015, this study). Based on the morphological comparison of our isolates with other Bactrodesmium, we accepted 35 species, although some of them possess unusual characters such as oblique or longitudinal septa, a mucilaginous cap at the conidial apex or conidiophores branched in a penicillate fashion, and thus their placement may be only temporary and in need of verification by DNA sequence data. The accepted species are distinctive in conidium morphology and to some extent also in conidiogenous cell morphology.
Based on in vitro studies and examination of herbarium material, the mode of conidial secession of Bactrodesmium is referred to as rhexolytic, exhibiting multiple secession patterns (Fig. 5). The conidial secession of some species is unknown or has been reported as schizolytic and should be re-evaluated in vitro. In the axenic culture of B. diversum (MLA, 6 wk), we regularly observed conidia that undergo a rhexolytic separation. In vitro, conidiogenous cells are terminal or intercalary, often globose to subglobose and monoblastic or polyblastic, usually in a chain to form monilioid conidiophores or similar vegetative hyphae or they are cylindrical to subcylindrical cells and appear monoblastic. Sometimes between the conidium and the conidiogenous cell is a smaller cell. We observed that the periclinal wall of the smaller subtending cell and sometimes also that of the globose conidiogenous cell of B. diversum began to degenerate or rupture (Fig. 5C–F, H). In the culture of B. pallidum (Fig. 5I) and B. spilomeum (MLA, 4–7 wk), conidia remained attached on the conidiophores or rarely were seen liberated, sometimes still connected to the slightly inflated conidiogenous cell. In the axenic culture of B. obovatum (MLA, 5–8 wk), we observed globose to subglobose or cylindrical conidiogenous cells, sometimes accompanied by a smaller subhyaline cell below the conidium (Fig. 5J, K, M–R). Eventually, they collapsed or ruptured to release the conidium which bears a basal frill. Given the intercalary position of the globose cells of B. obovatum and their various size, it is possible that one of the originally cylindrical cells of the conidiophore (near conidium) become inflated during conidium maturation and collapses to release the conidium still attached to the conidiogenous cell. A similar pattern of conidium secession was observed in cultures of B. abruptum (Figs 5L, 6L, N).
Fig. 5.
Multiple secession patterns of rhexolytic detachment of conidia in Bactrodesmium in vitro. A–H. Conidia and conidiogenous cells of B. diversum. I. Conidium of B. pallidum. J, K, M–R. Conidia and conidiogenous cells of B. obovatum. L. Conidia of B. abruptum. Arrows indicate globose conidiogenous cells or subtending cells which collapse. Images: A, B CBS 144079, C–H CBS 145969, I CBS 145349, J CBS 144407, K–O CBS 144078, P, R CBS 144077, Q CBS 145967. Bars: A–R = 10 μm.
Fig. 6.
Bactrodesmium abruptum. A, B. Sporodochial conidiomata on wood. C–J. Conidia and conidiophores. K. Clusters of conidia formed on submerged hyphae in the agar. L–O. Conidia and conidiophores. A–J. On natural substrate. K–O. On MLA. P. Colonies on MLA, OA and PCA after 4 wk. Images: A–D, J, O, M CBS 145966, E–G, I, K–N CBS 145967, H, P CBS 145968. Bars: A, B = 500 μm, C–J, L–M = 20 μm, K = 250 μm, P = 1 cm.
Conidia of Bactrodesmium characterised in this study have a conspicuous thickening at the centrum of each septum surrounding the pore. This feature is well visible especially in species with more or less evenly spaced septa such as B. diversum, B. leptopus, B. pallidum and B. spilomeum. In the side view, it is barrel-shaped but in surface view, the thickening has a circular outline. These structures resemble a dolipore septum occurring in basidiomycete hyphae. Similar structures were reported in several other hyphomycetes and coelomycetes, for example in Canalisporium spp. (Nawawi & Kuthubutheen 1989), Cancellidium applanatum (Tubaki 1975), or Sarcostroma grevilleae and S. hakeae (Nag Raj 1993). In Bactrodesmium, the barrel-shaped thickening in septal pores was noticed by Hughes & White (1983c) in B. spilomeum and described as a “conspicuous central pore“.
We believe that the present generic concept is the first step towards recognition of this little-understood genus and that the provided key containing important diagnostic characters will facilitate species identification and will help to bring forward new specimens and collection data so much needed to understand Bactrodesmium.
Key to species accepted in Bactrodesmium
-
1a.
Conidia with longitudinal and/or oblique septa………..2
-
1b.
Conidia with only transverse septa……………………..4
-
2a.
Apical and basal cells paler than the middle cells, subhyaline to pale brown………………………………...3
-
2b.
Apical cell not paler than the middle cells, conidia 2–3-septate, apical cell sometimes with an oblique septum, 14–20 × 11.5–13.5 μm, pyriform to obovoid, brown, frequently curved dorsiventrally…………B. peruvianum
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3a.
Conidia 4(–6)-septate, longitudinal septa in three apical cells, 22.5–29.5 × 11.5–14.5 μm, obovoid to cask-shaped, often bent…………………………B. pithoideum
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3b.
Conidia 4-septate, up to 3 longitudinal or oblique septa in apical and basal cells, (25–)29–32.5(–36) × (18–)20–23.5(–25.2) μm, broadly ellipsoidal, formed obliquely or laterally on the conidiogenous cell…........B. obliquum
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4a.
Apical and basal cells paler than the middle cells, hyaline or subhyaline to pale brown………………………5
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4b.
Apical cell not paler than the middle cells……………12
-
5a.
Conidia with black bands at the septa, (1–)4–5(–6)-septate, 20–35 × 9–18 μm, ellipsoidal, cylindrical or clavate, brown to dark brown………………..B. cedricola
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5b.
Conidia without black bands at the septa……………….6
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6a.
Conidia not or slightly to scarcely constricted at the septa…………………………………………………….....7
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6b.
Conidia not constricted at the septa……………………9
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7a.
Conidiophores penicillately branched, dense, conidia not or slightly constricted at the septa, 3–13-septate, 20–62.5 × 5.5–8 μm, cylindrical-fusiform, pale to mid brown (in vitro)………………………………B. guamense
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7b.
Conidiophores simple or sparsely branched, conidia slightly to scarcely constricted at the septa……………8
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8a.
Conidia (3–)5–8(–10)-septate, (18–)23–40 × 7–9.4 μm, ellipsoidal to clavate, brown…………………B. biformatum
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8b.
Conidia (4–)5(–6)–septate, (18–)20–23(–25) × 6.5–7.5 μm, elongate ellipsoidal to clavate, pale brown…………………………………………...B. pusillum
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9a.
Conidia 4-septate, central cell is the longest, 26–40 × 9–15 μm, ellipsoidal or cylindrical, brown to dark brown, apical and basal cells subhyaline to pale brown………………………………………….B. betulicola
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9b.
Conidia with more septa, cells of approximately the same size………………………………………………...10
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10a.
Conidiophores simple, conidia 6–9-septate, 30–44 × 11–14 μm, ellipsoidal or cylindrical, middle cells pale brown…………………………B. pluriseptatum
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10b.
Conidiophores penicillately branched, dense, conidia narrower………………………………………………….11
-
11a.
Conidia (2–)4–6(–8)-septate, (18–)30–55 × 5–6.5 μm, cylindrical, middle cells brown (in vitro)…...B. fruticosum
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11b.
Conidia 8–12-septate, 40–64 × 5–7 μm, fusiform, middle cells pale olivaceous grey, with a mucilaginous cap at the apex (in vitro)……………………B. ramosius
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12a.
Most cells equally pigmented with the basal cell sometimes paler, or apical and penultimate cells slightly darker than other cells and colour becoming paler towards the basal cell…………………………………….13
-
12b.
Apical cell darkest of all cells, occupying half or more than a half of the conidium…………………………….29
-
13a.
Conidia with black bands at the septa…………………14
-
13b.
Conidia without black bands at the septa……………17
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14a.
Conidia narrowly banded, apical cell prominent, 3–4-septate, (30–)33–55(–58) μm long, of two morphological types: obovoid to pyriform, light brown, (14–)17–26 μm wide or subglobose to lacrymoid, dark brown, (20–)26–40 μm wide………………B. moenitum
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14b.
Conidia with a broad band at the septum near the apex………………………………………………………15
-
15a.
Conidia (1–)2-septate, 14–26 × 3.5–7.5 μm, cylindrical, ellipsoid to obovoid, slightly curved, brown…B. xerophilum
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15b.
Conidia with more septa, septum near the apex obscured by a broad black band, the bands over other septa are progressively narrower towards the base…16
-
16a.
Black band at the septum near the apex 5.5–7(–8.5) μm wide, the penultimate cell is the largest of all cells, conidia (3–)4–6(–7)-septate, (36.5–)42–65.5(–70) × (12.5–)14–18(–19) μm, clavate to oblong-clavate, brown or reddish-brown…B. abruptum
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16b.
Black band at the septum near the apex 3.5–5 μm wide, apical and penultimate cells are approximately of the same size and larger than other cells, (3–)4–5-septate, (27.5–)35–46(–48) × 15.5–20 μm, clavate to obovoid, brown to dark brown………….B. obovatum
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17a.
Conidia 1–2-septate…………………………………….18
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17b.
Conidia with more septa………………………………..21
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18a.
Conidia 1-septate………………………………………..19
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18b.
Conidia 2-septate………………………………………..20
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19a.
Conidia 3–13 × 7–10 μm, obovoid to subglobose, brown………………………………..…B. novageronense
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19b.
Conidia 19–24 × 12–16 μm, pyriform, obovoid to globose, golden brown to pale olivaceous brown…………B. simile
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20a.
Conidia (21–)26–30 × (12.5–)13–16(–17.5) μm, obovoid to pyriform, brown to dark brown…B. pyriforme
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20b.
Conidia 10.5–15 × 5.5–7.5 μm, ellipsoidal to obovoid, brown……………………………………………...B. esheri
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21a.
Conidia slightly constricted at the septa, 8–11-septate, 36–54 × 11–15 μm, ellipsoidal to fusiform, brown to dark olivaceous brown…………………….B. hebridense
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21b.
Conidia not constricted at the septa………………….22
-
22a.
Conidia up to 14 μm wide………………………………23
-
22b.
Conidia wider than 14 μm………………………………27
-
23a.
Conidia up to 47 μm long………………………………24
-
23b.
Conidia longer than 47 μm…………………………….26
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24a.
Conidia with apical cells dark to mid-brown, colour becoming paler towards the base, 3–5(–6)-septate, 20–37 × 8–12 μm, clavate to ellipsoidal……………………………………………B. traversoanum
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24b.
Conidia with most cells equally pigmented, basal cell subhyaline………………………………………………..25
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25a.
Conidia subhyaline to yellowish-brown, 5–6-septate, 30–42 × 9–12, ellipsoidal to oval, narrowed towards the apex……………………………………….B. ellipsoideum
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25b.
Conidia pale to mid-brown, 3–5-septate, 24–43 ×8.5–11 μm, elongated ellipsoidal to ellipsoidal-clavate, rounded at the apex…………………………B. spilomeum
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26a.
Conidia yellowish to golden brown, 4–5-septate, 35–52 × 7–11 μm, clavate to cylindrical, rounded at the apex……………………………………………..B. indicum
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26b.
Conidia pale brown, (4–)5–6-septate, 29–54(–57) × 9–13 μm, elongated ellipsoidal or ellipsoidal-clavate, narrowed towards the apex……………B. pallidum
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27a.
Conidia 5–8-septate, 47–55 × 18–25 μm, obovoid to pyriform, brown………………………………B. nothofagi
-
27b.
Conidia narrower, up to 18 μm wide………………….28
-
28a.
Conidia 3–5(–6)-septate, (27–)30–48(–52.5) × (14–)15–19.5(–20.5) μm, clavate to ellipsoidal-clavate, occasionally pyriform or obovoid, or sigmoid, brown, apical cell(s) slightly darker, colour becoming paler towards the base……………………………………….B. diversum
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28b.
Conidia 3–5-septate, (21–)24–42(–44) × 11.5–15.5 μm, clavate to ellipsoidal-clavate, brown, becoming paler towards the base………………………………….B. leptopus
-
29a.
Conidia with up to three septa………………………….30
-
29b.
Conidia with more than three septa……………………33
-
30a.
Conidia abruptly curved at the base, 3-septate, 24–32 × 14–20 μm, subglobose to broadly pyriform, apical cell black-brown, basal cell pale brown………………………………………….B. curvatum
-
30b.
Conidia straight, apical cell(s) dark brown to black, basal cell hyaline to pale brown……………………….31
-
31a.
Conidia 2–3-septate, 30–47.5 × (17.5–)20–23.7 μm, obovoid or broadly clavate…………………B. globosum
-
31b.
Conidia with less than three septa, narrower, up to 20.5 μm wide…………………………………………….32
-
32a.
Conidia (0–)1–2-septate, 20–33.6 × 14.5–20.5 μm, subglobose to pyriform………………………….B. linderi
-
32b.
Conidia 1–2-septate, 15–25 × 10–15 μm, broadly pyriform………………………………………B. aquaticum
-
33a.
Conidia verrucose, 3–4-septate, 22–44 × 15.2–22 μm, obovoid, clavate or ellipsoidal, apical cell black, other cells pale brown………………………………B. palmicola
-
33b.
Conidia smooth, 3–5-septate………………………….34
-
34a.
Conidia with apical cell almost black, opaque, conidia obovoid, 43–72 × 22–38 μm……………………B. atrum
-
34b.
Conidia with apical cell brown, translucent in transmitted light, conidia clavate, 35–60 × 20–30 μm (in vitro)………………………………………………...B. mucosum
Bactrodesmium abruptum (Berk. & Broome) E.W. Mason & S. Hughes, Can. J. Bot. 36: 738. 1958. Fig. 6.
Basionym: Sporidesmium abruptum Berk. & Broome, Ann. Mag. nat. Hist., Ser. 3. 15: 401. 1865.
Synonyms: Clasterosporium abruptum (Berk. & Broome) Sacc., Syll. fung. 4: 389. 1886.
Bactrodesmium abruptum (Berk. & Broome) E.W. Mason & S. Hughes, in Walsh & Rimington, Nat. Hist. Scarborough Distr. 1: 159. 1953. (Nom. inval., Art. 41.5)
Description on the natural substrate: Asexual morph: Conidiomata sporodochial, scattered, superficial, black, shining, punctiform, pulvinate, sometimes confluent and irregular in outline, 150–500 μm diam. Mycelium mostly immersed, composed of septate, pale brown hyphae 2.5–4.5 μm wide. Conidiophores semi-macronematous, fasciculate, arising from basal hyphae, subhyaline to pale brown, simple, seldom branched, up to 45 μm long, 2.5–3 μm wide, septate. Conidiogenous cells terminal, integrated, monoblastic, 3–5.5 μm wide, oblong to short-cylindrical, often broadening towards the apex, hyaline, thin-walled. Conidia (36.5–)42–65.5(–70) × (12.5–)14–18(–19) μm (mean ± SD = 53.5 ± 6.2 × 16.5 ± 1.3 μm), 36.5–45 × (12.5–)17–19 μm (3-septate), (39–)42–52 × 13.5–19 μm (4-septate), 46.5–60(–62) × (14–)15–18(–19) μm (5-septate), (40–)58–65.5(–69) × 16–17.5 μm (6-septate), 63–70 × 14.5–17 μm (7-septate), 3–5 μm wide at the base, clavate to oblong-clavate, usually straight or slightly flexuous in the basal part, rounded at the apex, truncate at the base, (3–)4–6(–7)-septate, mostly 5-septate, smooth, with a large globule at each cell, brown to reddish-brown, darker in the upper part, the colour becoming progressively paler towards the basal cell which is hyaline to subhyaline to very pale brown and bears a short frill of wall. The penultimate cell is the largest of all cells; the septum near the apex is obscured by a broad black band 5.5–7(–8.5) μm wide, the black bands are progressively narrower toward the base. Sexual morph: unknown.
Description on MLA: Vegetative hyphae hyaline to subhyaline, 2–3 μm wide, septate, often monilioid. Conidiomata sporodochium-like, usually developed as clusters of fasciculate conidiophores. Conidiophores macronematous, semi-macronematous, mostly simple or sparsely branched, or micronematous often reduced to conidiogenous cells, hyaline, arising from aerial or submerged hyphae. Conidiogenous cells terminal, intercalary, integrated, monoblastic, 3.5–10 μm wide, hyaline, subglobose to globose or cylindrical to subcylindrical often broadening towards the apex. Conidia (19.5–)24.5–33.5 × (9–)10.5–17.5 μm (mean ± SD = 29.5 ± 2.9 × 13.3 ± 2.7 μm), (2.5–)3–4.5 μm wide at the base, clavate to oblong-clavate, rounded at the apex, truncate at the base, (2–)3–4(–5)-septate, the septum near the apex with a black band 4–5.5 μm wide, other septa narrowly banded, smooth, brown to reddish-brown, paler towards the basal cell, which is subhyaline to pale brown and bears a short frill of wall.
Culture characteristics: Colonies on MLA 11–12(–16) mm after 4 wk, circular, flat, convex centrally, margin entire, lanose, floccose becoming cobwebby towards the margin, beige to pale brown with a mid-brown outer zone of melanised submerged mycelium; reverse dark brown. Colonies on OA 11–16(–25) mm after 4 wk, circular, flat becoming slightly convex centrally, margin entire to weakly fimbriate, lanose, floccose towards the margin, olivaceous grey to grey-brown with a dark grey to dark olivaceous grey outer zone; reverse olivaceous brown. Colonies on PCA 16–20 mm after 4 wk, circular, flat, convex, margin entire to weakly fimbriate, lanose, floccose, beige with a mid-brown outer zone of submerged growth; reverse dark brown. Sporulation on all media after 6–8 wk or after prolonged incubation.
Habitat and distribution: Bactrodesmium abruptum occurs on decaying wood and bark of various deciduous trees in terrestrial and freshwater habitats; it has been collected so far on Acer pseudoplatanus, Beilschmiedia tawa, Fraxinus excelsior, Quercus sp., Robinia pseudoaccacia and on other unidentified substrates. The species is known in Europe in France and United Kingdom and New Zealand (Ellis, 1959, Hughes, 1978, this study).
Specimens examined: France, Ariège, Rimont, La Maille brook, 550 m a.s.l., on submerged wood, 28 May 2018 (incubated in moist chamber for 1 wk), J. Fournier M.R. 3953 (PRA-00016129, culture CBS 145968); ibid., J. Fournier M.R. 3957 (PRA-00016130, culture CBS 145967); ibid., on submerged wood of Fraxinus excelsior, 18 Oct. 2017, J. Fournier J.F. 17068 (culture CBS 144404); ibid., Ariège, Las Muros, Peyrau brook, 400 m a.s.l., on submerged wood of Robinia pseudoacacia, 9 Aug. 2018 (incubated in moist chamber for 1 wk), J. Fournier J.F. 18064 (PRA-00016128, culture CBS 145966). United Kingdom, England, Bodelwyddan, on decaying wood, Mar. 1864, Bloxam (holotype IMI 6833); ibid., St. Catherines, Batheaston, Apr. 1867, C.E. Broome, in Rabenhorst, Fungi europaei Exs. No. 1163 (IMI 6835).
Notes: Bactrodesmium abruptum is well distinguishable among other species of the genus by clavate to oblong-clavate, brown to reddish-brown, septate conidia with a conspicuous dark band over the septum near the apex and the penultimate cell, which is the largest of all cells. Conidia of B. abruptum in material from France were slightly shorter (36.5–)42.5–59(–61.5) × (12.5–)14–18(–19) μm than those from material originating from United Kingdom (40.5–)47.5–65.5(–70) × (13–)15–18 μm.
In the present phylogenetic analyses, B. abruptum is resolved as a sister to B. obovatum (Fig. 1, Fig. 2). The difference between both species lies in two motifs in the ITS region corresponding to 99.25 % sequence identity, rpb2 corresponding to 99.19 % identity and tef1-α corresponding to 99.28 % identity. Additional minor intraspecific variability occurs in the ITS and rpb2 genes. Despite high sequence similarity in the studied loci between them, they are morphologically well distinguishable and therefore treated as two separate species. The diagnostic phenotypic traits that characterise each species are consistent among collections of B. abruptum and B. obovatum in vitro and in vivo. However, all four strains of B. abruptum originate in a small area, in two brooks approximately 5 km apart. More collections of both species from various regions are needed to study their genetic variability.
Bactrodesmium obovatum differs from B. abruptum in having brown to dark brown, clavate to obovoid, shorter and broader, (3–)4–5-septate conidia, four septa being most common. Both species also differ by the length ratio between the apical and penultimate cells; in B. abruptum the penultimate cell is the largest of all cells, while in B. obovatum the apical and penultimate cells have approximately the same size and are always larger than the other cells. Both species share several morphological traits. Their conidia are narrowing towards the base to form a kind of a stipe, the upper cells are darkest becoming progressively paler towards the base, and the septum near the apex is thickly banded, though the band is wider in B. abruptum [5.5–7(–8.5) μm wide] than in B. obovatum (3.5–5 μm wide).
A comparison of the six strains (three per each species) on three media showed specific variability among them and also within each species. Bactrodesmium abruptum (Fig. 7A–C) generally forms more aerial mycelium on MLA, OA and PCA compared to B. obovatum (Fig. 7D–F) which is slower-growing with less developed aerial mycelium, which is abundant only at the centre of the colony. In the studied strains, hyphae at the margin of the colony are submerged, well-developed, melanised, usually visible as a distinct dark ring not yet overgrown by aerial mycelium, or the zone of submerged growth is wider and more prominent correlating with less developed aerial mycelium. On MLA, two strains of B. abruptum (CBS 145966, CBS 145968) grow slightly faster (13–16 mm) than the third strain CBS 145967 (11–12 mm), while the growth of all three B. obovatum strains on the same medium is comparable. On OA, strains of both species tend to produce olivaceous grey to olivaceous brown colonies, but their appearance varies within the species. Strains CBS 145967 of B. abruptum and CBS 145350 of B. obovatum grow slightly faster (21–26 mm) on OA than other strains of the same species (B. a.: 13–16 mm, B. o.: 13–14 mm). The appearance of the darker outer zones of submerged growth varies on OA; it is visible as a dark olivaceous grey to almost black ring (B.a.: CBS 145966 and CBS 145968, B.o.: CBS 144077 and CBS 144078) or as an irregular outer zone expanding radially (B.a.: CBS 145967) or the zone of submerged growth is partly obscured by abundant aerial mycelium at the margin of the colony while creating areas of sparse growth near the centre (B. o.: CBS 145350).
Fig. 7.
Diversity of colony morphology in B. abruptum (A–C) and B. obovatum (D–F). From left to right on MLA, OA and PCA after 4 wk. Images: A CBS 145966, B CBS 145968, C CBS 145967, D CBS 144078, E CBS 144077, F CBS 145350. Bar = 1 cm.
Bactrodesmium diversum Hern.-Restr., J. Mena, Gené & Guarro, Mycologia 105: 177. 2013. Fig. 8.
Fig. 8.
Bactrodesmium diversum. A, B. Sporodochial conidiomata on wood. C–F. Conidia and conidiophores. G. Sporodochial conidiomata. H. Conidia formed on hyphae submerged in the agar. I–M. Conidia and conidiophores (I–K in Melzer reagent, L, M in water). A–F. On natural substrate. G–M. On MLA. N. Colonies on MLA, OA and PCA after 4 wk. Images: A–D, G, J CBS 142448, E CBS 144405, F CBS 144081, H CBS 145965, I, K CBS 144079, L CBS 145969, M, N CBS 145970. Bars: A, B = 500 μm, C–F, I–M = 20 μm, G = 1 000 μm, H = 200 μm, N = 1 cm.
Description on the natural substrate: Asexual morph: Conidiomata sporodochial, scattered, superficial, black, shining, punctiform, pulvinate, 150–300 μm diam, sometimes confluent up to 500 μm diam. Mycelium mostly immersed in the substrate, composed of septate, subhyaline to pale brown hyphae 2–4 μm wide. Conidiophores macronematous to semi-macronematous, fasciculate, arising from basal hyphae, septate, subhyaline to pale brown, simple or sparsely branched, up to 65 μm long, 2.5–4 μm wide near the base. Conidiogenous cells terminal, integrated, polyblastic, 3–4.5 μm wide, oblong to cylindrical, often broadening towards the apex, thin-walled. Conidia (27–)30–48(–52.5) × (14–)15–19.5(–20.5) μm (mean ± SD = 42.3 ± 4.7 × 15.9 ± 1.4 μm), 28.5–31 × 12.5–15(–18) μm (3-septate), (27–)33–40(–42) × 15–17.5(–19) μm (4-septate), (33–)40–48(–52.5) × 15–19.5(–20.5) μm (5-septate), 44.5–50 × 17–20 μm (6-septate), 3–4(–4.5) μm wide at the base, clavate to ellipsoidal-clavate, occasionally pyriform or obovoid, sometimes curved at the base or slightly sigmoid, rounded at the apex, truncate at the base, 3–5(–6)-septate, smooth, with a conspicuous central pore at the septa and a large guttule at each cell, brown, the colour becoming paler towards the basal cell which is subhyaline to pale brown and often bears a short frill of wall. Sexual morph: unknown.
Description on MLA: Vegetative hyphae hyaline to subhyaline, 1.5–3 μm wide, septate, sometimes monilioid. Conidiomata sporodochium-like clusters, superficial or partly immersed in the agar, 150–250 μm diam, confluent, pulvinate, brown. Conidiophores semi-macronematous, septate, simple or sparsely branched, sometimes moniliform, or micronematous often reduced to conidiogenous cells, hyaline, thin-walled. Conidiogenous cells terminal, intercalary, integrated, polyblastic, 4–10 μm wide, hyaline, globose to subglobose or cylindrical to subcylindrical. Conidia 29–42 × (12–)13.5–15.5(–17) μm (mean ± SD = 33.9 ± 3.4 × 14.4 ± 1.1 μm), 3–3.5(–4) μm wide at the base, clavate to ellipsoidal-clavate, straight or curved at the base, 3–6-septate, smooth, with a conspicuous central pore at the septa and a large guttule at each cell, brown, the colour becoming paler towards the basal cell which is subhyaline to pale brown, sometimes with a short frill of wall.
Culture characteristics: Colonies on MLA 9–10 mm after 4 wk, circular, flat, slightly convex at the centre, margin entire, lanose, somewhat floccose at the periphery, beige becoming pale brown with a dark brown outer zone; reverse brown. Colonies on OA 11–12 mm after 4 wk, circular, flat, margin entire, velvety-lanose becoming floccose towards the margin, aerial mycelium bearing small, colourless droplets of exudate, ivory becoming beige with ca. 1–2 mm dark olivaceous brown outer zone; reverse olivaceous brown. Colonies on PCA 10–11 mm after 4 wk, circular, flat, slightly convex at the centre, margin fimbriate, lanose becoming floccose towards the margin, aerial mycelium bearing small, colourless droplets of exudate, beige to pale brown with a dark brown outer zone; reverse dark brown. Sporulation on all media after 6–8 wk or after prolonged incubation.
Specimens examined: France, Ariège, Rimont, La Maille brook, 560 m a.s.l., on submerged wood of Fraxinus excelsior, 19 Jun. 2017, J. Fournier J.F. 17033, MBT390462 (epitype designated here, PRA-00016136, culture ex-epitype CBS 144081 = IMI 506813); ibid., on submerged wood of a branch of Fraxinus excelsior, 4 Jul. 2016, J. Fournier J.F. 16051 (PRA-00016131, culture CBS 142448); ibid., on submerged wood of Robinia pseudoaccacia, 18 Oct. 2017, J. Fournier J.F. 17069 (PRA-00016137, culture CBS 144405); ibid., on submerged wood of Robinia pseudoaccacia, 9 Aug. 2018, J. Fournier J.F. 18066 (PRA-00016139, culture CBS 145965); ibid., on submerged wood, 28 May 2018 (incubated in moist chamber for 1 wk), J. Fournier M.R. 3954 (PRA-00016140, culture CBS 145970); ibid., J. Fournier M.R. 3955A (PRA-00016141, culture CBS 145969); Ariège, Rimont, Peyrau brook, ca. 400 m a.s.l., on submerged wood of Fraxinus excelsior, 15 Sep. 2016, J. Fournier J.F. 16056 (PRA-00016132, culture CBS 142450); ibid., on submerged wood of Fraxinus exclesior, 17 Jun. 2017, J. Fournier J.F. 17018 (PRA-00016133, culture CBS 144079); ibid., on submerged wood of Alnus glutinosa, associated with Bactrodesmium obovatum, 17 Jun. 2017, J. Fournier J.F. 17024 (PRA-00016134, culture CBS 144401); ibid., on submerged wood of Alnus glutinosa, associated with Bactrodesmium obovatum and Varicosporella aquatica, 17 Jun. 2017, J. Fournier J.F. 17025A (PRA-00016135, culture CBS 144080); ibid., on submerged wood, 7 Apr. 2018 (incubated in moist chamber for 1 wk), J. Fournier J.F. 18007 (PRA-00016138, culture CBS 145435).
Habitat and distribution: Bactrodesmium diversum occurs on decaying wood of deciduous trees in terrestrial and freshwater habitats; it has been collected so far on Alnus glutinosa, Fraxinus excelsior, Robinia pseudoaccacia and other undetermined substrates. The species is known in Europe in France and Spain (Hernández-Restrepo et al. 2013, this study).
Notes: Bactrodesmium diversum is characterised by clavate to ellipsoidal-clavate, 3–5(–6)-septate conidia, sometimes slightly curved at the base, brown becoming paler towards the basal cell. The present species is reminiscent of B. spilomeum, which is distinguished by subtler, brown, often elongated sporodochia and conidia which are elongated ellipsoidal to ellipsoidal-clavate, narrower and pale brown with most cells equally pigmented and a subhyaline to pale brown basal cell. Bactrodesmium leptopus (Saccardo, 1881a, Saccardo, 1886) is highly similar to B. diversum in the conidial size and shape but differs by paler brown, 3–5-septate conidia (see also Hughes & White 1983c). Bactrodesmium traversoanum (Ellis 1959) resembles B. diversum in clavate to ellipsoidal, brown conidia which become paler towards the basal cell, but is distinguished by shorter and narrower conidia (20–37 × 8–12 μm). Among our specimens, B. diversum was one of the most commonly encountered species in the freshwater habitat.
Bactrodesmium leptopus (Sacc.) S. Hughes, Can. J. Bot. 36: 739. 1958. Fig. 9.
Fig. 9.
Bactrodesmium leptopus (CBS 144542). A, B. Sporodochial conidiomata on wood. C–G. Conidia and conidiophores. H. Clusters of sporodochial conidiomata and conidia. I–M. Conidia and conidiophores. A–G. On natural substrate. H–M. On MLA. N. Colonies on MLA, OA and PCA after 4 wk. Bars: A, B = 500 μm, C–G, I–M = 20 μm, H = 1 000 μm, N = 1 cm.
Basionym: Clasterosporium clavaeforme (Preuss) Sacc. var. leptopus Sacc., Fungi italici autogr. del. 17–28. Tab. 749. 1881; Syll. Fung. 4: 391. 1886.
Synonym: Clasterosporium leptopus (Sacc.) Mussat, Syll. fung. 15: 90. 1901.
Description on the natural substrate: Asexual morph: Conidiomata sporodochial, scattered, superficial, black, punctiform, pulvinate, 150–300 μm diam, often confluent up to 500 μm diam. Mycelium mostly immersed in the substrate, composed of septate, subhyaline to pale brown hyphae 2–3.5 μm wide. Conidiophores macronematous to semi-macronematous, fasciculate, arising from basal hyphae, septate, hyaline to subhyaline, sparsely branched, up to 70 μm long, 2–3.5 μm wide near the base. Conidiogenous cells terminal, integrated, monoblastic, 2.5–3.5 μm wide, oblong to cylindrical, sometimes slightly broadening towards the apex, hyaline, thin-walled. Conidia (21–)24–42(–44) × 11.5–15.5 μm (mean ± SD = 34.4 ± 4.8 × 12.5 ± 1.3 μm), (21–)24–29 × 11.5–15.5 μm (3-septate), (29–)31–37 × 12–14.5(–15) μm (4-septate), 35–42(–44) × 11.5–15.5 μm (5-septate), 2.5–3.5 μm wide at the base, clavate to ellipsoidal-clavate, rounded to slightly narrowed at the apex, truncate at the base, 3–5-septate, predominantly 5-septate, smooth, with a conspicuous central pore at the septa and a large guttule at each cell, brown becoming paler towards the base, basal cell subhyaline to pale brown with a short frill of wall. Sexual morph: unknown.
Description on OA: Vegetative hyphae hyaline to subhyaline, 1.5–2.5 μm wide, septate. Conidiomata sporodochium-like clusters, confluent. Conidiophores semi-macronematous or micronematous often reduced to conidiogenous cells, sparsely branched, hyaline, composed of cylindrical or slightly inflated cells, arising from aerial and submerged hyphae. Conidiogenous cells terminal, intercalary, integrated, monoblastic, 3.5–4.5(–5) μm wide, hyaline, subcylindrical to oblong, sometimes slightly expanding apically. Conidia 25.5–34(–36) × 9–12.5 μm (mean ± SD = 29.4 ± 2.8 × 11.2 ± 1.0 μm), 3–4.5 μm wide at the base, clavate or pyriform or ellipsoidal-clavate, rounded or slightly narrowed at the apex, truncate at the base, 3–4-septate, brown to olivaceous brown, paler towards the basal cell, which is subhyaline to pale brown and bears a short frill of wall.
Culture characteristics: Colonies on MLA 11–13 mm after 4 wk, circular, slightly convex, margin fimbriate, lanose, floccose becoming cobwebby towards the margin, colony centre beige becoming beige-brown with a dark brown outer zone, brown pigment diffusing from the colony margin to 1–1.5 mm into the surrounding agar; reverse brown. Colonies on OA 11–14 mm after 4 wk, circular, flat, raised margin, margin fimbriate, velvety-lanose, floccose to cobwebby towards the margin, beige-grey becoming paler towards the periphery with irregular whitish floccose patches of aerial mycelium at the margin, grey to olivaceous grey pigment diffusing from the colony margin to 2–2.5 mm into the surrounding agar; reverse dark olivaceous grey. Colonies on PCA 15–17 mm after 4 wk, circular to irregular, flat, margin fimbriate, lanose, floccose becoming cobwebby towards the margin, locally smooth corresponding to irregular spots of sparse growth, beige to pale brown becoming dark brown towards the periphery, beige to pale brown pigment diffusing from the colony margin to ca. 1 mm into the surrounding agar; reverse brown. Sporulation on OA after 4 wk, on MLA and PCA after 6–8 wk or after prolonged incubation.
Specimen examined: Czech Republic, South Moravia, Hodonín distr., Mikulčice oppidum, Mikulčický luh Nature Park, Malá Pinuška, on decaying wood of Acer campestre, 7 Nov. 2017, M. Réblová M.R. 3933 (PRA-00016150, culture CBS 144542).
Habitat and distribution: Bactrodesmium leptopus occurs on decaying wood of Acer campestre and Ficus carica (Saccardo 1881a, this study). This species is known in Europe in the Czech Republic and Italy.
Notes: Bactrodesmium leptopus was illustrated (Saccardo 1881a) and described (Saccardo, 1881b, Saccardo, 1886) with sporodochium-like conidiomata and 3–6-septate, fusiform to ovoid-clavate, brown conidia, 30–40 × 15–20 μm. The type material was not available to us, but it was examined earlier by Hughes & White (1983c). These authors observed that conidia in the holotype were scattered rather than aggregated, mostly clavate, 3–5-septate, straight or irregularly bent and gave the following measurements: 23.4–29.7 × 11.7–16.2 μm (3-septate), 23.4–41.5 × (10.8–)12.6–18 μm (4-septate) and 32–47 × 11.7–16.2 μm (5-septate). However, the scattered conidia could be a result of disruption of fragile conidiomata in old herbarium material, a feature that we often observed in our material from freshwater when fine sand and detritus disrupted conidiomata. Our specimen matches well B. leptopus based on measurements of the holotype given by Hughes & White (1983c), though, the maximum of the width of conidia being slightly smaller.
Bactrodesmium spilomeum closely resembles B. leptopus but differs by narrower (8.5–11 μm wide in B. s. vs 11.5–15.5 μm wide in B. l.) and more ellipsoidal conidia. Hughes & White (1983c), who studied holotypes of both species, concluded to keep them separate until further variation in the conidia of B. spilomeum (see below) is established from European collections. Based on the examination of our specimens of B. leptopus and B. spilomeum and its type material, supported by the present phylogenetic analyses, we follow this conclusion and B. leptopus and B. spilomeum are treated as separate species in this study.
Bactrodesmium obovatum (Oudem.) M.B. Ellis, Mycol. Pap. 87: 42. 1963. Fig. 10.
Fig. 10.
Bactrodesmium obovatum. A, B. Sporodochial conidiomata on wood. C–G. Conidia and conidiophores. H. Conidia formed on hyphae submerged in the agar. I–K. Conidia and conidiophores. A–G. On natural substrate. H–K. On MLA. L. Colonies on MLA, OA and PCA after 4 wk. Images: A–D CBS 145350, E, F, H, J–L CBS 144078, G, I CBS 144077. Bars: A, B = 500 μm, C–G, I–K = 20 μm, H = 200 μm, L = 1 cm.
Basionym: Cryptocoryneum obovatum Oudem., Ned. kruidk. Archf, 3 sér. 2: 313. 1901.
Synonym: Bactrodesmium arnaudii Hughes, Can. J. Bot., 36: 738. 1958.
Description on the natural substrate: Asexual morph: Conidiomata sporodochial, scattered, superficial, black, shining, punctiform, pulvinate, sometimes confluent and irregular in outline, 200–500 μm diam. Mycelium mostly immersed, composed of septate, subhyaline to pale brown hyphae 2.5–4.5 μm wide. Conidiophores semi-macronematous, fasciculate, arising from basal hyphae, subhyaline to pale brown, simple or branched, up to 60 μm long, 2.5–4 μm wide, septate, cells sometimes slightly inflated. Conidiogenous cells terminal, integrated, monoblastic, 3–5 μm wide, oblong to short-cylindrical, often broadening towards the apex, hyaline, thin-walled. Conidia (27.5–)35–46(–48) × 15.5–20 μm (mean ± SD = 42.6 ± 3.4 × 17.7 ± 1.3 μm), (27.5–)38.5–40 × 15.5–18 μm (3-septate), (30–)35–46(–48) × 15.5–20 μm (4-septate), 38–47(–48 × 16.5–20 μm (5-septate), 3–5 μm wide at the base, clavate to obovoid, rounded at the apex, truncate at the base, (3–)4–5-septate, mostly 4-septate, smooth, with a large globule at each cell, brown to dark brown, darker in the upper part, the colour becoming progressively paler towards the basal cell which is hyaline to subhyaline to very pale brown and bears a short frill of wall. The apical and penultimate cells are approximately the same size and larger than other cells; the septum near the apex is obscured by a broad black band 3.5–5 μm wide, the black bands are progressively narrower toward the base. Sexual morph: unknown.
Description on MLA: Vegetative hyphae hyaline to subhyaline, 2–3.5 μm wide, septate. Conidiomata sporodochium-like clusters. Conidiophores semi-macronematous, mostly simple or sparsely branched, or micronematous often reduced to conidiogenous cells, hyaline, arising from aerial or submerged hyphae. Conidiogenous cells terminal, intercalary, integrated, monoblastic, 4.5–12 μm wide, hyaline, subglobose to globose or cylindrical to subcylindrical and often broadening towards the apex. Conidia (27–)29.5–34.5(–47) × 10–13.5(–16.5) μm (mean ± SD = 31.2 ± 3.7 × 11.6 ± 1.0 μm), 3–4 μm wide at the base, clavate to obovoid, rounded at the apex, truncate at the base, (2–)3–4(–5)-septate, the septum near the apex with a black band 3–3.5 μm wide, other septa narrowly banded, smooth, brown to dark brown, paler towards the basal cell, which is subhyaline to pale brown and bears a short frill of wall.
Culture characteristics: Colonies on MLA 8–11 mm after 4 wk, circular, flat, slightly convex centrally, margin entire, velvety, pale brown becoming dark brown towards the margin; reverse dark brown. Colonies on OA 13–14(–26) mm after 4 wk, circular, flat, margin entire to weakly fimbriate, velvety to velvety-lanose, floccose towards the margin, olivaceous grey to olivaceous brown with a dark olivaceous grey to almost black outer zone; reverse olivaceous brown. Colonies on PCA 10–13 mm after 4 wk, circular, flat, margin entire to weakly fimbriate, velvety to velvety-lanose, beige becoming brown towards the periphery; reverse dark brown. Sporulation after 4 wk only on PCA in CBS 145350; sporulation of other strains on different media after 6–8 wk or after prolonged incubation.
Habitat and distribution: Bactrodesmium obovatum occurs on decaying wood and bark of various deciduous trees in terrestrial and freshwater habitats; it has been collected so far on Alnus glutinosa, Betula sp., Carpinus betulus, Carya ovata, Corylus avellana, Fagus crenata, Fagus sylvatica, Fraxinus excelsior, Fraxinus angustifolia, Populus sp., Quercus sp. and Ulmus sp. The species is known in Europe in the Czech Republic, France, the Netherlands, United Kingdom, and Spain, in Asia in Japan and also in North America in the U.S.A. and Canada (Hughes, 1958, Ellis, 1959, Ellis, 1963, Holubová-Jechová, 1972, Matsushima, 1975, Hughes and White, 1983a, Mena-Portales et al., 2000, this study).
Specimens examined: Czech Republic, South Moravia, Hodonín distr., Mikulčice oppidum, Mikulčický luh Nature Park, Malá Pinuška, on decaying wood of Fraxinus excelsior, associated with Bactrodesmium cf. diversum, 7 Nov. 2017, M. Réblová M.R. 3938 (PRA-00016145, culture CBS 144407). France, Ariège, Rimont, La Maille brook, 550 m a.s.l., on submerged wood of Corylus avellana, 19 Jun. 2017, J. Fournier J.F. 17031 (PRA-00016143, culture CBS 144077); ibid., Las Muros, Peyrau brook, 400 m a.s.l., on submerged wood of Fraxinus excelsior, 17 Jun. 2017, J. Fournier J.F. 17026 (PRA-00016142, culture CBS 144078); ibid., on submerged wood, 14 Mar. 2018 (incubated in moist chamber until 7 Apr. 2018), J. Fournier J.F. 18006A (PRA-00016144, culture CBS 145350).
Notes: Bactrodesmium obovatum is based on Cryptocoryneum obovatum introduced by Oudemans (1901). Ellis (1963) studied three collections of this species from Ouedeman’s herbarium and concluded that C. obovatum is conspecific with Bactrodesmium arnaudii (Hughes 1958), which he earlier illustrated and described from numerous collections from England (Ellis 1959). Bactrodesmium arnaudii was introduced based on erroneously used name Bactrodesmium fasciculare sensu Mason & Hughes (1953) (Nom. inval., Art. 41.5) after examining a portion of Fuckel’s material of “Sporidesmium” fasciculare. Ellis (1959) examined the type collection of S. fasciculare and confirmed that it is a different fungus conspecific with Trichocladium opacum (Hughes 1952) (= Pleotrichocladium opacum, Hernández-Restrepo et al. 2017). We have not examined Ouedeman’s material now deposited in the National Herbarium of the Netherlands (L) in Leiden because it was not available to us, but we accept Ellis’s synonymy. Our material matches well the fungus described and illustrated by Ellis (1959) under the name B. arnaudii and Hughes & White (1983a) under the name B. obovatum.
Bactrodesmium obovatum is morphologically similar to B. abruptum, but the latter species differs in having brown to reddish-brown, clavate to oblong-clavate, longer [(36.5–)42–65.5(–70) μm] and usually slightly narrower [(12.5–)14–18(–19) μm], (3–)4–6(–7)-septate conidia, five septa being most common, the penultimate cell is the largest of all cells and the band at the septum near the apex is wider. The in vitro variability among selected strains of B. abruptum and B. obovatum is depicted in Fig. 7 and discussed above.
Bactrodesmium pallidum M.B. Ellis, Mycol. Pap. 72: 11. 1959. Fig. 11.
Fig. 11.
Bactrodesmium pallidum. Sporodochial conidiomata on wood. D–J. Conidia and conidiophores. K–M. Conidia and conidiophores. A–J. On natural substrate. K–M. On MLA. N. Colonies on MLA, OA and PCA after 4 wk. Images: A–C, E, F, J–N CBS 145349, D, I PRA-00016148, G, H CBS 142449. Bars: A–C = 500 μm, D–M = 20 μm, N = 1 cm.
Description on the natural substrate: Asexual morph: Conidiomata sporodochial, scattered, superficial, brown to dark brown, punctiform, pulvinate, 120–300 μm diam, often elongated or confluent up to 500 μm diam. Mycelium mostly immersed in the substrate, composed of septate, subhyaline to pale brown hyphae 2–4 μm wide. Conidiophores macronematous to semi-macronematous, fasciculate, arising from basal hyphae, hyaline to subhyaline, sparsely branched, up to 75 μm long, 2–3.5 μm wide near the base, septate. Conidiogenous cells terminal, integrated, monoblastic, 2.5–3.5(–5) μm wide, sympodially elongating, oblong to cylindrical, often broadening towards the apex, hyaline, thin-walled. Conidia 29–54(–57) × 9–13 μm (mean ± SD = 43.3 ± 5.9 × 10.9 ± 1.0 μm), 29–33(–37) × 9–10(–11) μm (4-septate), (32–)35–47(–55) × 9.5–13 μm (5-septate), 42–54(–57) × 9–12.5 μm (6-septate), 1.5–3.5 μm wide at the base, elongated ellipsoidal or ellipsoidal-clavate, narrowed towards the apex, truncate at the base, (4–)5–6-septate, predominantly 5-septate, smooth, with a conspicuous central pore at the septa and a large guttule at each cell, pale brown, cells equally pigmented except the basal cell which is sometimes very pale brown to subhyaline and often bears a short frill of wall. Sexual morph: unknown.
Description on MLA: Vegetative hyphae hyaline to subhyaline, 1.5–3 μm wide. Colonies effuse, conidiomata not observed. Conidiophores micronematous often reduced to conidiogenous cells, hyaline. Conidiogenous cells terminal, intercalary, integrated, monoblastic, 2.5–4 μm wide, hyaline, subcylindrical to oblong, broadening towards the apex, sometimes slightly inflated. Conidia 28.5–47(–50) × 7.5–10 μm (mean ± SD = 39.4 ± 7.4 × 8.9 ± 0.9 μm), (2.5–)3–4 μm wide at the base, elongated ellipsoidal to ellipsoidal-clavate, rounded or narrowed at the apex, sometimes with a short protuberance at the top of the apical cell, truncate at the base, 4–6-septate, central pore at the septa indistinct, with one to several small guttules in each cell, pale brown, cells equally pigmented, basal cell of the same colour or very pale brown to subhyaline, basal frill of the wall indistinct (conidia remained mostly attached).
Culture characteristics: Colonies on MLA 7–9 mm after 4 wk, circular, slightly convex, margin entire, lanose, zonate, beige becoming grey-brown towards the margin with a beige ring and outer cinnamon-brown zone; reverse brown. Colonies on OA 12–15 mm after 4 wk, circular, flat, margin entire, lanose, floccose becoming cobwebby towards the margin, creamy, olivaceous brown towards the periphery due to conspicuous submerged growth; reverse dark olivaceous brown. Colonies on PCA 9–10 mm after 4 wk, circular, flat, margin entire, lanose, floccose, beige with a cinnamon-brown outer zone; reverse brown. Sporulation on all media after 6–8 wk or after prolonged incubation.
Specimens examined: France, Ariège, Rimont, La Maille brook, 550 m a.s.l., on submerged wood of Fraxinus excelsior, 19 Jun. 2017, J. Fournier J.F. 17030 (PRA-00016148); ibid., Las Muros, Peyrau brook, 400 m a.s.l., on submerged wood of Fraxinus excelsior, 15 Sep. 2016, J. Fournier J.F. 16057 (PRA-00016146, culture CBS 142449); ibid., on submerged wood of Robinia pseudoaccacia, 17 Jun. 2017, J. Fournier J.F. 17020 (PRA-00016147, culture CBS 145349). Spain, Cantabria, Saja-Besaya Natural park, on decaying wood of a twig, Jul. 2010, M. Hernández-Restrepo, J. Mena & J. Guarro (culture CBS 130515 = FMR 11345). United Kingdom, England, Yorkshire, Kingthorpe Woods, on bark of Fraxinus excelsior, Nov. 1945, E.W. Mason & S.J. Hughes (holotype of B. pallidum IMI 1355b).
Habitat and distribution: Bactrodesmium pallidum occurs on decaying wood and bark of various deciduous trees in terrestrial and freshwater habitats; it has been collected so far on Fagus sylvatica, Fraxinus excelsior, Quercus sp., and Robinia pseudoaccacia and other unidentified hosts. It is known from Europe in the Czech Republic, United Kingdom, France and Spain (Ellis, 1959, Holubová-Jechová, 1972, this study)
Notes: The conidia of B. pallidum are usually narrowed towards the apex; sometimes conidia form a short protrusion on the apical cell in culture. Bactrodesmium spilomeum is similar to B. pallidum, but differs by shorter (24–43 μm) and slightly darker brown, 3–5-septate, predominantly 4-septate conidia; the 6-septate conidia are uncommon and occur only in some collections (Holubová-Jechová, 1972, Hughes and White, 1983c). Holubová-Jechová (1972) questioned the distinction between B. pallidum and B. spilomeum and suggested that the former species is most likely a variety of B. spilomeum and transferred the name to its synonymy. Hughes & White (1983c) suggested that the elongation in conidia of B. pallidum is accompanied by narrowing to form the longer 4–6-septate conidia. In the phylogenetic trees (Fig. 1, Fig. 2), B. pallidum and B. spilomeum are resolved as separate, though closely related species.
Bactrodesmium ellipsoideum and B. indicum, described by Rao (1983) from decaying bark in India, resemble B. pallidum in conidial morphology. Bactrodesmium indicum is distinguished from B. pallidum by narrower (7–11 μm), 4–5-septate, yellowish to golden brown conidia rounded at the apex, while B. ellipsoideum differs from it by shorter (30–42 μm), ellipsoidal conidia which are illustrated as somehow narrowed at the apex. Bactrodesmium diversum, B. ellipsoideum, B. indicum, B. leptopus, B. pallidum and B. spilomeum compose a group of morphologically highly similar species with pale brown to golden brown, thin-walled, transversely septate, cylindrical, elongated ellipsoidal to ellipsoidal-clavate conidia without bands at the septa. The morphological and molecular phylogenetic study is necessary to resolve the taxonomy of this species complex.
Bactrodesmium spilomeum (Berk. & Broome) E.W. Mason & S. Hughes, Can. J. Bot. 31: 616. 1953. Fig. 12.
Fig. 12.
Bactrodesmium spilomeum (CBS 146104). A, B. Sporodochial conidiomata on wood. C–G. Conidia and conidiophores. H–M. Conidia and conidiophores. A–G. On natural substrate. H–M. On MLA. N. Colonies on MLA, OA and PCA after 4 wk. Bars: A, B = 500 μm, C–M = 20 μm, N = 1 cm.
Basionym: Sporidesmium spilomeum Berk. & Broome, in Rabenhorst, Fungi europaei Exs. No. 1162. 1868.
Description on the natural substrate: Asexual morph: Conidiomata sporodochial, scattered, superficial, brown, punctiform, pulvinate, 120–300 μm diam, often elongated or confluent up to 480 μm diam. Mycelium mostly immersed in the substrate, composed of septate, subhyaline to pale brown hyphae 2–3.5 μm wide. Conidiophores macronematous to semi-macronematous, fasciculate, arising from basal hyphae, septate, hyaline to subhyaline, sparsely branched, up to 90 μm long, 2–3.5 μm wide near the base. Conidiogenous cells terminal, integrated, monoblastic, 2.5–4.5 μm wide, oblong to subcylindrical, often broadening towards the apex, hyaline, thin-walled. Conidia 24–43 × 8.5–11 μm (mean ± SD = 33 ± 4.3 × 9.9 ± 0.7 μm), 24–28 × 9–10.5 μm (3-septate), (28–)30–38 × 9–10 μm (4-septate), 37–43 × 10–11 μm (5-septate), 2.5–3.5 μm wide at the base, elongated ellipsoidal or ellipsoidal-clavate, rounded at the apex, truncate at the base, 3–5-septate, predominantly 4-septate, smooth, with a conspicuous central pore at the septa and a large guttule at each cell, pale brown to pale golden brown, cells equally pigmented except the basal cell which is paler, very pale brown to subhyaline and often bears a short frill of wall. Sexual morph: unknown.
Description on OA: Vegetative hyphae hyaline 2–3.5 μm, sometimes monilioid 5–9.5 μm wide. Colonies effuse, conidiomata not observed. Conidiophores semi-macronematous, sometimes sparsely fasciculate, or micronematous, hyaline, occasionally monilioid and formed by inflated cells. Conidiogenous cells terminal, integrated, rarely intercalary, monoblastic, 3.5–4.5 μm wide, hyaline, subcylindrical to oblong, broadening towards the apex. Conidia 23–39(–43) × (6–)6.5–9 μm (mean ± SD = 32.2 ± 4.2 × 7.8 ± 0.7 μm), 23–29.5 × 7.5–9 μm (3-septate), 28.5–39 × 6–9 μm (4-septate), 33.5–43 × 7.5–8.5 μm (5-septate), 2.5–4 μm wide at the base, elongated ellipsoidal to ellipsoidal-clavate, rounded at the apex, truncate at the base, 3–5-septate, predominantly 4-septate, smooth, with a central pore at each cell, mid-brown, basal cell pale brown to subhyaline.
Culture characteristics: On MLA colonies 7–8 mm diam after 4 wk, circular, flat, slightly convex centrally, margin fimbriate, velvety-lanose, floccose, grey-brown, dark brown at the margin due to melanised submerged hyphae; reverse dark brown to nearly black. On OA colonies 6–8 mm diam after 4 wk, circular, flat, margin fimbriate, sparsely lanose, floccose becoming cobwebby, dark olivaceous grey becoming dark grey-brown towards the periphery with an indistinct pale olivaceous beige outer zone of submerged growth; reverse dark olivaceous brown. On PCA colonies 7–8 mm diam after 4 wk, circular, flat, margin fimbriate, colonies similar to those on MLA, velvety-lanose, floccose, grey-brown, dark brown at the margin; reverse dark brown. Sporulation abundant on OA after 4 wk, sparse on MLA and PCA after 8 wk.
Specimens examined: France, Ariège, Rimont, Las Muros, Peyrau brook, 400 m a.s.l., on submerged wood, 14 Mar. 2018 (incubated in moist chamber until 7 Apr. 2018), J. Fournier J.F. 18006B (PRA-00016149, culture CBS 146104). United Kingdom, England, Batheaston, on decaying wood of a trunk of Ulmus campestris, Apr. 1867, C.E. Broome, in Rabenhorst, Fungi europaei Exs. No. 1162 (holotype IMI 45899).
Habitat and distribution: Bactrodesmium spilomeum occurs on decaying wood and bark of various deciduous trees in terrestrial and freshwater habitats; it has been collected so far on Acer pseudoplatanus, Acer saccharum, Betula lutea, Betula sp., Fagus grandifolia, Fagus sylvatica, Fraxinus angustifolia, Fraxinus excelsior, Populus tremuloides, Tilia cordata, and Ulmus campestris and on other unidentified hosts. The species is known in Europe in the Czech Republic, France and United Kingdom and in North America in Canada (Ellis, 1959, Holubová-Jechová, 1972, Hughes and White, 1983c, this study).
Notes: Although the width of conidia of B. spilomeum has been reported consistently around (8–)9–12.5 μm (Ellis, 1959, Holubová-Jechová, 1972, this study), conidia in some European and Canadian collections examined by Hughes & White (1983c) were wider and thus resembling those of B. leptopus.
Bactrodesmium leptopus is reminiscent of B. spilomeum in the morphology of pale brown, ellipsoidal to clavate, 3–5-septate conidia but differs by broader (11.5–15.5 μm) conidia. Bactrodesmium pallidum closely resembles B. spilomeum but differs in having longer [29–54(–57) μm], paler, ellipsoidal to ellipsoidal-clavate conidia narrowed towards the apex with (4–)5–6 septa, 5-septate being the most common. Bactrodesmium traversoanum (Peyronel, 1916, Ellis, 1959, Hughes and White, 1983d) is similar to B. spilomeum but differs in having ellipsoidal to clavate and darker brown conidia becoming paler towards the base. For morphological comparison among B. spilomeum and other morphologically similar species see notes under B. pallidum.
Genera segregated from Bactrodesmium and additional species of the Pleurotheciales and Savoryellales characterised in this study
Aphanodesmium Réblová & Hern.-Restr., gen. nov. MycoBank MB832922
Etymology: Aphanés (Gk) inconspicuous, unseen, referring to the “hidden” endophytic life style of the fungus; desmós (Gk) = bond, link, referring to the aggregated conidia in sporodochium-like conidiomata.
Type species: Aphanodesmium gabretae (Koukol & Kolářová) Réblová & Hern.-Restr.
Description: Asexual morph: Colonies effuse with sporodochium-like clusters in vitro. Conidiophores semi-macronematous or micronematous, loosely fasciculate, branched, sometimes swollen, hyaline. Conidiogenous cell monoblastic, integrated, terminal. Conidia dry, solitary, ellipsoidal to obovoid, distoseptate with transverse and oblique septa, pigmented, basal cell hyaline to pale brown. Conidia secede rhexolytically. Sexual morph: unknown.
Aphanodesmium gabretae (Koukol & Kolářová) Réblová & Hern.-Restr., comb. nov. MycoBank MB832923
Basionym: Bactrodesmium gabretae Koukol & Kolářová, Nova Hedwigia 91: 244. 2010.
Description: For description and illustration refer to Koukol & Kolářová (2010).
Habitat and distribution: Aphanodesmium gabretae exhibit an endophytic life style and occurs in needles of Picea abies. The species is so far known in Europe in the Czech Republic (Koukol & Kolářová 2010).
Notes: Given the morphology of sporodochia, fasciculate conidiophores, monoblastic conidiogenous cells and pigmented, distoseptate and dictyoseptate conidia seceding rhexolytically, this fungus was originally assigned to Bactrodesmium with affinity to the Helotiales based on the Blast search of ITS and LSU sequences (Koukol & Kolářová 2010). In our phylogeny, the ex-type strain ZK171 of B. gabretae is nested in the Helotiales; it resides in an incertae sedis lineage as a sister taxon to two apothecial species with unknown sexual-asexual connections, i.e. Aquapoterium pinicola (strain ATCC MYA-4213, Raja et al. 2008) and Unguicularia unguiculata (strain NK 322). Therefore, B. gabretae is excluded from Bactrodesmium and segregated into a new genus Aphanodesmium and a new combination is proposed.
Aphanodesmium gabretae was isolated from green needles of Picea abies incubated on agar plates. In vitro, the fungus forms effuse colonies (on 2 % malt extract) with abundant whitish, aerial mycelium and sporodochium-like clusters at the margin of the colony.
Ascotaiwania Sivan. & H.S. Chang, Mycol. Res. 96: 481. 1992.
Type species: Ascotaiwania lignicola Sivan. & H.S. Chang, Mycol. Res. 96: 481. 1992.
Notes: The genus Ascotaiwania was introduced by Sivanesan & Chang (1992) for saprobic lignicolous fungi resembling Savoryella (Jones & Eaton 1969) and characterised by non-stromatic ascomata with a lateral neck lying horizontally or obliquely on the host, transversely septate ascospores with brown middle cells and hyaline end cells, stipitate asci with a prominent non-amyloid apical ring and rapidly disintegrating paraphyses. The distinction between the two genera has always been challenging and was based predominantly on ascospore septation and the morphologies of the ascal apex and also paraphyses to some extent. A survey of these diagnostic characters and their interpretation by various authors was summarised in Réblová et al. (2016a). The monodictys-like asexual morph of A. lignicola, the generic type, was experimentally verified by Chang (2001). Up to date, 15 binomials were introduced in Ascotaiwania (Index Fungorum), some of which were reassigned to different genera based on the evidence of DNA molecular data, i.e. Helicoascotaiwania (Dayarathne et al. 2019), Neoascotaiwania (Hernández-Restrepo et al. 2017) and Pseudoascotaiwania (Yang et al. 2016). Nonetheless, the remaining species represent a heterogeneous assemblage, of which only six (A. hsilio, A. latericolla, A. lignicola, A. mitriformis, A. sawadae, A. wulai) conform to the sexual diagnostic morphological traits of Ascotaiwania and only two of them, A. latericolla and A. lignicola, produce dictyoconidia. Despite morphological similarity, the monophyly of Ascotaiwania is not statistically supported (Fig. 1, Fig. 2).
A key to species of Ascotaiwania sensu lato
-
1a.
Sexual morph known, ascospores transversely septate……………………………………………………..2
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1b.
Sexual morph unknown, asexual morph triadelphia-like; conidiogenous cells ampulliform, conidia 1-septate, obovoid, upper cell dark brown, lower cell brown 12.5–16 × 6.5–10.5 μm……………………A. uniseptata
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2a.
Ascomata lying horizontally or obliquely towards the surface of the substrate, neck erect, lateral, on decaying wood……………………………………………………….3
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2b.
Ascomata upright with a central ostiole, on decaying wood, grass, or palm glade………………………………9
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3a.
Ascospores versicolorous, middle cells brown, end cells hyaline to subhyaline……………………………………..4
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3b.
Ascospores uniformly pale brown, 5–7-septate, 19–30 × 6–8 μm……………………………A. mauritiana
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4a.
Ascospores 7-septate…………………………………….5
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4b.
Ascospores with less than seven septa……………….7
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5a.
Ascospores 62 μm or longer, 62.5–72.5 × 12.5–17.5 μm, monotosporella-like asexual morph………………………………A. mitriformis
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5b.
Ascospores 62 μm or shorter……………………………6
-
6a.
Ascospores 14 μm or wider, 53–62 × 14–16 μm…A. wulai
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6b.
Ascospores narrower than 14 μm, 42–55 × 8–13 μm, monodictys-like asexual morph………………A. lignicola
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7a.
Ascospores 3-septate, 25.2–44.6 × 7.1–10.3 μm, monotosporella-like asexual morph………..A. sawadae
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7b.
Ascospores 5-septate, 25–35 × 7–9 μm………………8
-
8a.
Asci up to 140 μm long, 120–140 × 12.3–13.4 μm, trichocladium-like asexual morph……………….A. hsilio
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8b.
Asci longer than 140 μm, 190–237 × 14–17.5 μm, monodictys-like asexual morph…………….A. latericolla
-
9a.
Ascospores versicolorous………………………………10
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9b.
Ascospores uniformly yellow or light brown, (2–)3(–5)-septate, 16–25 × 5–7 μm………………………A. pallida
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10a.
Ascospores 3-septate…………………………………...11
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10b.
Ascospores 7-septate, 28.5–37.5 × 6–7.8 μm…A. licualae
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11a.
Ascospores 5 μm or wider, 17.5–20 × 5–6.5 μm, asci 150 μm or longer…………………………….A. palmicola
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11b.
Ascospores narrower than 5 μm, 18–22 × 3.5–4 μm, asci shorter than 150 μm………………A. pennisetorum
Ascotaiwania latericolla Réblová, Hern.-Restr. & J. Fourn. sp. nov. MycoBank MB833391. Fig. 13.
Fig. 13.
Ascotaiwania latericolla (ICMP MB22739). A–C. Ascomata. D. Vertical section of the ascomal wall. E, F. Asci containing ascospores. G–I. Ascospores. J. Ascal apex with the apical ring. K, L. Monodictys-like asexual morph on the natural substrate. A–L. On natural substrate. M. Colonies on MLA, OA and PCA after 4 wk. Bars: A–C = 500 μm, D–F = 20 μm, G–L = 10 μm, M = 1 cm.
Typification: New Zealand, Auckland Region, Waitakere Ranges Nature Reserve, ca. 30 km SW from Auckland, Anawhata Road, on decaying wood, 24 Apr. 2005, M. Réblová M.R. 3530/NZ 824 (holotype PDD 117342, culture ex-type ICMP 22739).
Etymology: Collum (L) neck, lateralis (L) lateral, referring to the lateral position of the neck on ascomata.
Description on the natural substrate: Sexual morph: Ascomata perithecial, non-stromatic, solitary to aggregated, immersed to semi-immersed becoming erumpent, black, flask-shaped, glabrous with sparse dark brown hyphae at the base, lying horizontally or obliquely towards the surface of the substrate, with a lateral, erect, rostrate or beak-like neck. Venter 450–750 μm high, 200–320 μm diam, ellipsoidal, often laterally flattened. Neck 200–450 μm high, 100–120 μm diam, cylindrical. Ostiole periphysate. Ascomatal wall leathery, 20–27 μm thick, two-layered; outer layer consisting of 3–4 rows of thick-walled, brown, polyhedral cells of textura angularis to prismatica, inner layer consisting of several rows of subhyaline to hyaline, thin-walled, elongated cells of textura prismatica. Paraphyses hyaline, septate, 4–8 μm wide, tapering to 2–2.5 μm, deliquescing early and observed only as fragments in ascomata containing mature ascospores. Asci 190–237 × 14–17.5 μm (mean ± SD = 208.7 ± 20.7 × 15.2 ± 1.5 μm), in the sporiferous part 157–168(–183) μm long (mean ± SD = 169 ± 10.1), cylindrical, long-stipitate. Ascal apex obtuse with a non-amyloid ring 7–7.5 μm wide and 3–3.5 μm high. Ascospores (24.5–)25.5–32.5(–35) × 7.5–8.5(–9) μm (mean ± SD = 29 ± 2.5 × 8 ± 0.4 μm), fusiform, inequilateral, straight to slightly curved in the side view, transversely 5-septate, smooth-walled, versicolorous, the middle cells brown, end cells hyaline, shorter and obtusely to narrowly rounded; ascospores obliquely uniseriate or biseriate to partially overlapping biseriate in the ascus, no appendages or mucilaginous sheath observed. Asexual morph: Colonies effuse, with irregular outline, blackish brown, composed of individual conidia. Mycelium scant, mostly immersed, hyaline to subhyaline, composed of septate hyphae ca. 1.5–2.5 μm wide. Conidiophores micronematous, reduced to undifferentiated hyphal branches; conidial secession probably schizolytic. Conidiogenous cells not preserved. Conidia dry, terminal, blastic, globose, subglobose to ellipsoidal, (12.5–)13.5–22 × (9.5–)10.5–17.5(–18.5) μm (mean ± SD = 16.6 ± 2.6 × 14.0 ± 2.3 μm), reddish brown to dark brown, dictyosporous, slightly constricted at the septa.
Culture characteristics: On MLA colonies 8–9 mm diam after 4 wk, circular, flat, margin fimbriate, velvety-lanose, whitish-beige with a dark olivaceous brown outer zone of submerged growth; reverse dark olivaceous brown. On OA colonies 16–18 mm diam after 4 wk, circular, flat, margin fimbriate, lanose, floccose, cobwebby at the margin, pale beige becoming olivaceous brown towards the margin with a prominent zone of submerged growth; reverse dark olivaceous brown. On PCA colonies 12–13 mm diam after 4 wk, circular, flat, slightly convex centrally, margin fimbriate, lanose, floccose, cobwebby at the margin, beige with a dark brown outer zone of submerged growth; reverse dark brown. On OA and PCA, pale olivaceous brown pigment diffusing from the colony margin into the surrounding agar. Sporulation absent on all media, even after prolonged incubation (>3 mo).
Habitat and distribution: Ascotaiwania latericolla occurs on decaying wood in terrestrial habitats. The species is so far known in New Zealand.
Notes: Based on morphology of ascospores, asci, ascomata and DNA sequence data, the present species is attributed to Ascotaiwania and introduced as the new species A. latericolla. Although the axenic culture derived from ascospores remained sterile, a monodictys-like fungus forming effuse colonies around ascomata on the host likely represents the asexual morph of A. latericolla. Conidiogenous cells were not preserved on the natural substrate. Ascotaiwania lignicola differs from the present species by larger (42–55 × 8–13 μm) 7-septate ascospores, and larger (234–290 × 13–19 μm) asci and (29.5–42.75 × 17.25–44.5 μm) conidia (Sivanesan and Chang, 1992, Chang, 2001). Ascotaiwania hsilio (Chang et al. 1998) resembles A. latericolla in size and septation of ascospores but differs by shorter and narrower (120–140 × 12.3–13.4 μm) asci and a trichocladium-like asexual morph.
Dematiosporium Z.L. Luo, K.D. Hyde & H.Y. Su, Fung. Diver. 99: 573. 2019. Emend. Réblová, Hern.-Restr. & J. Fourn.
Type species: Dematiosporium aquaticum Z.L. Luo, K.D. Hyde & H.Y. Su
Emended description: Asexual morph: Colonies effuse, black-brown, composed of individual conidia. Mycelium scant, mostly immersed, hyaline to subhyaline. Conidiophores micronematous, reduced to undifferentiated hyphal branches; conidial secession probably schizolytic. Conidiogenous cells terminal, integrated, monoblastic in vitro. Conidia dry, single, terminal, blastic, globose, subglobose, ellipsoidal or pyriform, pigmented, dictyosporous. Sexual morph: unknown.
Notes: Dematiosporium was introduced by Luo et al. (2019) for a hyphomycete with dry, dark brown to black, mostly globose to subglobose, smooth conidia. The type species, D. aquaticum, was recollected on submerged wood in France and successfully obtained in axenic culture. Based on our observations in vitro and in vivo, the generic description sensu Luo et al. (2019) is inaccurate because it does not contain diagnostic characters of conidia, i.e. the conidia are dictyosporous with a pore at each cell (Fig. 14L, M). The photographs accompanying the protologue of D. aquaticum do not have sufficient quality to recognize the septation and presence of pores inside conidia. Although difficult to see, some figures (Luo et al. 2019: fig. 45c–e, j) show traces of septa in conidia, but these are not interpreted or described. The generic and species descriptions are therefore emended to include diagnostic characters of conidia. Although the conidiogenous cells were not preserved on the natural substrate, they are described and illustrated based on in vitro observations.
Fig. 14.
Dematiosporium aquaticum (CBS 144793). A. Effuse colony with visible single conidia. B–E. Conidia. F. Conidia formed on submerged hyphae in agar. G, H. Conidial initials. I–N. Conidia and conidiophores (pores indicated by arrows). A–E. On natural substrate. F–N. On MLA. O. Colonies on MLA, OA and PCA after 4 wk. Bars: A = 250 μm, B–E, G–N = 10 μm, F = 500 μm, O = 1 cm.
The comparison of Dematiosporium to Conioscypha (Höhnel 1904) by Luo et al. (2019) is misleading, and these genera are not morphologically similar. Conioscypha (Conioscyphales) is characterised by aseptate, dark brown conidia and a unique mode of blastic conidiogenesis, when conidia are born in cyathiform to doliiform blastic conidiogenous cells surrounded by hyaline, cup-like collarettes with a multilamellar structure (Shearer & Motta 1973).
The monodictys-like genus Dematiosporium is placed in the Savoryellales as a sister to a clade containing Canalisporium and Savoryella (Fig. 1, Fig. 2). Based on available ITS and LSU sequence data of Monodictys putredinis (Hughes 1958) (strain CBS 127855, Vu et al. 2019), the type species of Monodictys (Hughes 1958), this genus is nested in the Pleosporales. Although Dematiosporium and Monodictys form effuse colonies and share similar conidia, conidiogenous cells and conidiophores, however, such morphology is rather nondescript; these characters do not facilitate identification of morphologically similar genera and attest to the polyphyletic nature of Monodictys (see Discussion).
Dematiosporium aquaticum Z.L. Luo, K.D. Hyde & H.Y. Su, Fung. Diver. 99: 573. 2019. Emend. Réblová, Hern.-Restr. & J. Fourn. Fig. 14.
Description on the natural substrate: Asexual morph: Colonies effuse, with irregular outline, blackish brown, composed of individual conidia, which are scattered or aggregated, positioned vertically, superficial. Mycelium scant, mostly immersed, hyaline to subhyaline, composed of septate, unbranched or simply branched hyphae 3.5–5 μm wide. Conidiophores micronematous, reduced to undifferentiated hyphal branches from which conidia arise; conidial secession probably schizolytic. Conidiogenous cells not preserved. Conidia dry, terminal, blastic, mostly globose, subglobose to ellipsoidal, 24–28(–31) × (18–)19.5–26(–30) μm (mean ± SD = 26.2 ± 2.5 × 23.1 ± 2.7 μm), sometimes obpyriform, 33.5–38 × (18–)19–25(–29.5) μm (mean ± SD = 35.6 ± 2.1 × 23.2 ± 4.6 μm), chestnut brown to dark brown to nearly black, dictyosporous, slightly constricted at the septa, with a pore in each cell. Sexual morph: unknown.
Description on MLA: Vegetative hyphae hyaline to pale brown, unbranched or simply branched, sometimes anastomosing, 1.5–3.5 μm, septate. Colonies effuse. Conidiophores semi-macronematous or micronematous, often reduced to undifferentiated hyphal branches. Conidiogenous cells terminal, integrated, monoblastic, either indistinguishable from other cells, hyaline, oblong to subcylindrical or pale brown and lageniform, 9–9.5 × 4 μm. Conidia dry, terminal, intercalary, subspherical to ellipsoidal, 18–25 × 15–20.5 μm (mean ± SD = 20.8 ± 2.8 × 19.1 ± 2.4 μm), rarely almost triangular, 20.5–22 μm long, 20.5–24 μm wide at the base (mean ± SD = 21.3 ± 1.2 × 22.3 ± 2.4 μm), brown, dictyosporous, constricted at the septa, with a pore in each cell.
Culture characteristics: On MLA colonies 10–11 mm diam after 4 wk, circular, flat, slightly convex centrally, margin fimbriate, lanose, floccose becoming cobwebby towards the margin, beige with a brown outer zone of melanised submerged hyphae; reverse brown. On OA colonies 12–14 mm diam after 4 wk, circular, flat, margin fimbriate, sparsely lanose becoming cobwebby at the margin, beige, pale brown towards the periphery with an indistinct pale beige outer zone of submerged growth; reverse pale brown. On PCA colonies 13–14 mm diam after 4 wk, circular, flat, margin fimbriate, similar to colonies on MLA, lanose, floccose, cobwebby at the margin, beige with a brown outer zone of melanised submerged hyphae; reverse brown. Sporulation on MLA after 8 wk, absent on OA and PCA.
Habitat and distribution: Dematiosporium aquaticum occurs on decaying submerged wood of Alnus glutinosa and other unidentified substrates. The species is so far known in Europe in France and in Asia in China (Luo et al. 2019, this study).
Specimens examined: France, Ariège, Rimont, Las Muros, Peyrau brook, 400 m a.s.l., on submerged wood of Alnus glutinosa, 14 Mar. 2018, J. Fournier J.F. 18009 (PRA-00016156, culture CBS 144793); ibid., M. Fournier J.F. 18012 (PRA-00016157); ibid., La Maille brook, 550 m a.s.l., on submerged wood, 28 May 2018 (incubated in moist chamber for 1 wk), J. Fournier M.R. 4081 (PRA-00016158).
Notes: The ontogeny of conidia in vitro on MLA is depicted in Fig. 14G–M. The conidial initials are pigmented, straight, transversely septate becoming cheiroid and coiled and result in dictyosporous conidia at maturity.
Monodictys paradoxa (incertae sedis) is similar to D. aquaticum in having brown dictyoconidia of a comparable size, but differs in conidia with one or more of the basal cells paler than the others and monilioid conidiophores (Ellis, 1971, Prasher and Verma, 2016). Monodictys putredinis resembles D. aquaticum in subglobose, ellipsoidal to pyriform conidia and absence of inflated cells in conidiophores (Hughes, 1958, Ellis, 1971), but differs by slightly larger (20–30 × 15–25 μm fide Ellis 1971) conidia and the systematic placement in the Pleosporales. Dematiosporium aquaticum can also be compared to the monodictys-like asexual morphs of two Ascotaiwania; A. lignicola differs by larger (29.5–42.75 × 17.25–44.5 μm), dark reddish-brown dictyoconidia (Chang 2001), while A. latericolla has smaller [(12.5–)13.5–22 × (9.5–)10.5–17.5(–18.5) μm], dark reddish-brown to brown conidia (this study).
Gamsomyces Hern.-Restr. & Réblová, gen. nov. MycoBank MB834446
Etymology: This genus is named in honour of the late Walter Gams, our colleague and friend, for his contribution to mycology.
Type species: Gamsomyces longisporus (M.B. Ellis) Hern.-Restr. & Réblová
Description: Asexual morph: Colonies with sporodochial or synnematous conidiomata. Conidiophores semi-macronematous or macronematous, fasciculate, simple or penicillately branched, subhyaline to brown. Conidiogenous cells monoblastic, integrated, terminal, elongating percurrently. Conidia dry, solitary, curved, fusiform, pigmented, transversely euseptate, with a mucilaginous cap at the apex. Conidia secede schizolytically. Sexual morph: unknown.
Notes: Multigene phylogenetic analysis of three strains of Bactrodesmium longisporum and B. stilboideum revealed they were unrelated to Bactrodesmium; they formed a strongly supported lineage in the Sclerococcales (Eurotiomycetes), which is introduced as the new genus Gamsomyces (Fig. 4). Two species are accepted in the genus, and new combinations are proposed. Gamsomyces differs from Bactrodesmium in having inconspicuous, brown to olivaceous brown conidiomata, both sporodochia and synnemata, presence of a mucilaginous cap at the apex of conidia, absence of dark bands over the transverse septa and morphology of the conidiogenous cells. The percurrently elongating conidiogenous cells on the natural substrate, first mentioned by Hughes (1978) in G. longisporus, are in agreement with our observations (Fig. 15G). The same mode of the conidiogenous cell elongation is also present in G. stilboideus (Fig. 17E).
Fig. 15.
Gamsomyces longisporus. A–C. Synnemata (A, viewed from the top). D. Sporodochium-like conidioma (indicated by arrow). E, L. Upper part of the synnema with conidiogenous cells and conidia. F, H. Conidia and conidiogenous cells. G. Conidiogenous cells (arrows indicate percurrently elongating conidiogenous cells. I–K. Conidia. A–L. On natural substrate. Images: A, K, L CBS H-3931, B–J CBS H-3972. Bars: A–D = 100 μm, E, L = 50 μm, F–K = 10 μm.
Fig. 17.
Gamsomyces stilboideus (CBS 146494). A–D. Synnemata. E. Upper part of the synnema with conidiogenous cells (arrow indicates percurrently elongating conidiogenous cells). F, L, M. Conidia. G, H. Synnemata and densely branched conidiophores with conidia. J, K. Conidiophores with conidia. A–F. On natural substrate. G–M. On CBSOA. N. Colonies on CBSOA and MEA after 2 wk. Bars: A, B, H = 100 μm, C, D, I = 50 μm, E, J, K = 25 μm, F, L, M = 10 μm, G = 200 μm, N = 1 cm.
Key to species of Gamsomyces
-
1a.
Sporodochia and synnemata on the natural substrate, synnemata 74–305 μm long, conidia 11–16-septate, 48.5–74 × 6–8 μm, or longer up to 80 μm fide (Ellis 1976) and 95 μm fide (Hughes 1978) with up to 21 septa; in vitro only sporodochia formed, conidia 41–163.5 × 5.5–8 μm, (6–)14–25-septate………………………….G. longisporus
-
1b.
Only synnemata 380–455 μm long on the natural substrate, conidia 10–13-septate, 46–69 × 7–9 μm, or shorter 30–55 × 7–8 μm (fide Castañeda-Ruiz & Arnold 1985); in vitro synnemata 325–633 μm long, conidia 42–90 × 6.5–10 μm, (5–)14–16-septate…G. stilboideus
Gamsomyces longisporus (M.B. Ellis) Hern.-Restr. & Réblová, comb. nov. MycoBank MB834448. Fig. 15, Fig. 16.
Fig. 16.
Gamsomyces longisporus. A–C. Sporodochia. D, E. Conidiophores with conidiogenous cells. F–K. Conidia. A–K. On CBSOA. L. Colonies on CBSOA and MEA after 4 wk. Images: A, C, E CBS 240.89, B, D, F–L CBS 118.86. Bars: A, B = 200 μm, C, K = 50 μm, D–J = 10 μm, L = 1 cm.
Basionym: Bactrodesmium longisporum M.B. Ellis, More dematiaceous Hyphomycetes: 68. 1976.
Synonym: Stigmina longispora (M.B. Ellis) S. Hughes, New Zealand Journal of Botany 16: 353. 1978.
Description on the natural substrate: Asexual morph: Co-nidiomata sporodochial or synnematous, scattered, superficial, dark brown, synnemata 74–305 μm long and 18.5–35 μm wide. Conidiophores macronematous, fasciculate, unbranched or branched, subhyaline or pale brown, septate. Conidiogenous cells terminal, integrated, monoblastic, 4.5–13 × 2–4 μm, subcylindrical, brown, elongating percurrently. Conidia 48.5–74 × 6–8 μm (mean ± SD = 62.4 ± 7.5 × 7.3 ± 0.7 μm), fusiform, usually straight or slightly flexuous, truncate at the base, rounded to subulate or capitate at the apex with a mucilaginous cap, 11–16-septate, smooth, brown, paler towards both ends, apical cell hyaline to subhyaline, collapsing, secession schizolytic. Sexual morph: unknown.
Description on OA: Conidiomata sporodochial, scattered, superficial, punctiform, black, 50–170 μm diam. Mycelium mostly immersed, composed of septate, pale brown hyphae, 1.5–2.5 μm wide. Conidiophores semi-macronematous to macronematous, fasciculate, unbranched or densely branched, subhyaline or pale brown, septate, up to 50 μm long, 2–4 μm wide. Conidiogenous cells terminal, integrated, monoblastic, 4.5–12.45 × 2.5–4 μm, subcylindrical, pale brown. Conidia 41–163.5 × 5.5–8 μm (mean ± SD = 130.1 ± 22.6 × 6.8 ± 0.5 μm), 2–2.5 μm wide at the base, fusiform, usually straight or slightly flexuous, truncate at the base, rounded to subulate or capitate at the apex with a mucilaginous cap 5–7.5 diam, (6–)14–25-septate, smooth, pale brown to brown to olivaceous brown, paler towards both ends, apical cell hyaline, secession schizolytic.
Culture characteristics: Colonies on CBSOA 7–10 mm after 4 wk, circular, flat becoming slightly convex centrally, margin entire, lanose, powdery towards the margin, colony centre lavender grey to olivaceous grey with an olivaceous outer zone; reverse olivaceous buff. Colonies on MEA 12–15 mm after 4 wk, circular, convex, margin entire, lanose, floccose, pale olivaceous grey to olivaceous black; reverse pale mouse grey to olivaceous grey. Sporulation on CBSOA after 4 wk or after prolonged incubation.
Specimens examined: India, Karnataka, Shimoga, Agumbe, on rotten branches, Oct. 1985, V. Rao (CBS H-3848, culture CBS 118.86); ibid., Karnataka, Jog Falls, on rotten twigs, Oct. 1985 V. Rao (CBS H-3931); ibid., Tirupati, Andhra Pradesh, on rotten twig, Sep. 1983, V. Rao (CBS H-3972). Japan, Arashiyama near Kyoto, on decaying stem of bamboo, Sep. 1988, W. Gams (CBS H-9344 as dried culture, culture CBS 240.89).
Habitat and distribution: Gamsomyces longisporus occurs on decaying wood, timber and bamboo stems; it has been collected so far on Alnus sp., Beilschmiedia tarairi, Olearia rani, bamboo and other unidentified hosts. The species is known in Africa in South Africa, Australia, Asia in Hong Kong, India, Japan, Philippines and Taiwan, Europe in United Kingdom, Middle America in Guatemala and Mexico, New Zealand and South America in Brazil, Peru and Venezuela (Ellis, 1976, Hughes, 1978, Rao and de Hoog, 1986, Matsushima, 1993, Chang, 1997, Wong and Hyde, 2001, Cai et al., 2003, Vijaykrishna and Hyde, 2006, Castañeda-Ruiz et al., 2009, Barbosa and Gusmão, 2011, Figueroa et al., 2016, Santa Izabel and Gusmão, 2016, Heredia et al., 2018).
Notes: Gamsomyces longisporus was described with sporodochial conidiomata from timber in mines in United Kingdom (Ellis 1976) and originally placed in the genus Bactrodesmium. Hughes (1978) transferred the species to Stigmina (Mycosphaerellales) based on percurrently elongating conidiogenous cells occurring in older specimens. Rao & de Hoog (1986) studied material from India and encountered variability in conidioma morphology; sporodochia and sometimes both synnemata and sporodochia were formed on the natural substrate. Rao & de Hoog (1986) questioned the taxonomic value of synnema vs sporodochium (see Discussion). They did not follow Hughes’s taxonomic treatment, instead, they proposed B. longisporum conspecific with morphologically similar but synnematous B. stilboideum and accepted the species in Bactrodesmium.
Based on molecular DNA evidence, both species were transferred from Bactrodesmium to the new genus Gamsomyces and treated as separate taxa. In the three examined collections from India, conidiomata were sporodochial in CBS H-3848, sporodochium-like or short synnemata up to 74 μm long were formed in CBS H-3931, or conidiomata were mostly synnematous up to 305 μm long and also sporodochium-like in CBS H-3972 (Fig. 15A–D); cultures of the two latter specimens are not available. Strains of G. longisporus CBS 118.86 (ex CBS-H 3848) and CBS 240.89 (ex CBS H-9344 as dried culture, Japan) formed exclusively sporodochia in vitro (Fig. 16A, B).
Because G. longisporus and G. stilboideus were considered conspecific, the given geographical distribution of the former species since Rao & de Hoog (1986) may not be accurate and needs to be confirmed with new specimens or revision of herbarium material.
Gamsomyces longisporus is similar to G. stilboideus (Castañeda-Ruiz & Arnold 1985) but differs from the latter species by longer conidia, 50–80 μm fide Ellis (1976), 95 μm fide Hughes (1978) vs 30–55 μm fide Castañeda-Ruiz & Arnold (1985), with generally more septa 8–20 vs 6–11. The size of conidia in our material matches that of the holotype (Ellis 1976). Bactrodesmium ramosius (Matsushima 1993), described from decaying wood of a broad-leaf tree in Amazonia, is highly similar to G. longisporus in morphology of sporodochial conidiomata, transversely septate conidia with a mucilaginous cap and densely branched conidiophores formed in vitro, but it differs in shorter (40–64 μm) conidia with less septa, 8–12. Bactrodesmium fruticosum (Matsushima 1993) and B. guamense (Matsushima 1981) are well comparable to G. longisporus; in vitro, they produce sporodochia with conidiophores branched in a penicillate fashion and brown, transversely septate conidia, although lacking the mucilaginous cap. However, the conidia of B. fruticosum are illustrated with the basal frill of the wall suggesting rhexolytic secession (Matsushima 1993).
Gamsomyces stilboideus (R.F. Castañeda & G.R.W. Arnold) Hern.-Restr. & Réblová, comb. nov. MycoBank MB834450. Fig. 17.
Basionym: Bactrodesmium stilboideum R.F. Castañeda & G.R.W. Arnold, Revta. Jardín bot. Nac. Univ. Habana 6(1): 48. 1985.
Synonym: Stigmina longispora var. stilboidea (R.F. Castañeda & G.R.W. Arnold) J. Mena & Mercado, Rep. de Investigación del Instituto de Ecología y Sistemática, Academia de Ciencias de Cuba, Ser. Bot. 17: 10. 1987.
Description on the natural substrate: Asexual morph: Conidiomata synnematous, scattered, superficial, dark brown to dark olivaceous brown, 380–455 μm long and 30–45 μm wide. Conidiophores macronematous, fasciculate, unbranched or branched, brown, septate. Conidiogenous cells terminal, integrated, monoblastic, 6.5–18.5 × 2.5–4 μm, subcylindrical, brown, elongating percurrently. Conidia 46–69 × 7–9 μm (mean ± SD = 57.7 ± 6.2 × 8 ± 0.6 μm), fusiform, usually straight or slightly flexuous, truncate at the base, rounded to subulate or capitate at the apex with a mucilaginous cap, 10–13-septate, smooth, brown, paler towards both ends, apical cell hyaline to subhyaline, secession schizolytic. Sexual morph: unknown.
Description on OA: Conidiomata synnematous, scattered, superficial, dark brown, up to 630 μm long and 22–60 μm wide. Conidiophores macronematous, fasciculate, unbranched or branched, subhyaline to brown, septate. Conidiogenous cells terminal, integrated, monoblastic, 9–20 × 2–3 μm, subcylindrical, brown. Conidia 42–90 × 6.5–10 μm (mean ± SD = 75.4 ± 12.9 × 8.8 ± 0.9 μm), fusiform, usually straight or slightly flexuous, truncate at the base, rounded to subulate or capitate at the apex with a mucilaginous cap, (5–)14–16-septate, smooth, brown, paler towards both ends, apical cell hyaline to subhyaline, secession schizolytic.
Culture characteristics: Colonies on MEA 2–4 mm after 2 wk, circular, convex, margin entire, lanose, floccose, pale purplish grey; reverse buff to smoke grey. Colonies on CBSOA 5–6 mm after 2 wk, circular, flat becoming slightly convex centrally, margin entire, lanose centrally, smooth towards the margin, colony centre lavender grey to pale olivaceous grey, white towards the margin; reverse not different from the colony surface. Sporulation on CBSOA after 4 wk or after prolonged incubation.
Habitat and distribution: Gamsomyces stilboideus is a saprobe on decaying wood of an unidentified host and dead leaves of Calyptronoma plumeriana. The species is known in Middle America in Cuba and Puerto Rico (Castañeda-Ruiz & Arnold 1985, this study)
Specimen examined: USA, Puerto Rico, on dead submerged twig, 19 Jul 2018, M. Hernández-Restrepo MHR18017 (culture CBS 146494).
Notes: Gamsomyces stilboideus was described from fallen leaves of Calyptronoma plumeriana in Cuba (Castañeda-Ruiz & Arnold 1985). Our isolate of G. stilboideus is another record of this species from the Caribbean, although the conidia in the holotype tend to be shorter and slightly narrower (30–55 × 7–8 μm fide Castañeda-Ruiz & Arnold 1985). Gamsomyces stilboideus and G. longisporus are well distinguishable by size of conidia based on their protologues (Ellis, 1976, Castañeda-Ruiz and Arnold, 1985), but the conidial size of our specimens of these species partially overlapped on the natural substrate causing their identification difficult. However, both species are well distinguishable by DNA data and characters in culture, G. stilboideus differs in the formation of synnemata and shorter and wider (42–90 × 6.5–10 μm) (5–)14–16-septate conidia, while G. longisporus forms exclusively sporodochia and longer and narrower 41–163.5 × 5.5–8 μm (6–)14–25-septate conidia.
Helicoascotaiwania Dayarathne, Maharachch. & K.D. Hyde, Front. Microbiol. 10(840): 22. 2019.
Type species: Helicoascotaiwania farinosa (Linder) Réblová, Hern.-Restr. & J. Fourn.
Notes: Helicoascotaiwania is a member of the Pleurotheciales and accommodates saprobic freshwater species morphologically reminiscent of Ascotaiwania (Savoryellales). It is characterised by immersed, flask-shaped, non-stromatic perithecial ascomata lying mostly horizontally to the substrate, cylindrical, stipitate asci with a prominent apical plug and a shallow non-amyloid ring in the ascal apex, early deliquescing paraphyses, transversely septate ascospores with middle cells brown and end cells hyaline to subhyaline and a helicosporous asexual morph, which has been linked to only one species. A new combination and a new species are proposed below.
Key to species of Helicoascotaiwania
-
1a.
Ascomatal wall darkest on the outside, asci (6.5–)9–10 μm wide…………………………………..H. farinosa
-
1b.
Ascomatal wall darkest on the innermost side, asci 11–14.5(–16) μm wide………………………...H. lacustris
Helicoascotaiwania farinosa (Linder) Réblová, Hern.-Restr. & J. Fourn., comb. nov. MycoBank MB832929. Fig. 18.
Fig. 18.
Helicoascotaiwania farinosa (ILLS 53605). A. Vertical section of the ascoma. B. Ascospores. A, B. On natural substrate. Bars: A = 100 μm, B = 20 μm.
Basionym: Helicoön farinosum Linder, Ann. Mo. bot. Gdn 16: 324. 1929.
Synonyms: Ascotaiwania hughesii Fallah, J.L. Crane & Shearer, Can. J. Bot. 77: 89. 1999.
Helicoascotaiwania hughesii (Fallah, J.L. Crane & Shearer) Dayarathne & K.D. Hyde, Front. Microbiol. 10(840): 22. 2019.
Description: For descriptions and illustrations refer to Fallah et al. (1999) and Linder (1929).
Specimen examined: U.S.A., Wisconsin, Vilas County, Sparkling Lake, on submerged wood, 8 Aug. 1994, P.M. Fallah P2-6 (holotype of Ascotaiwania hughesii ILLS 53605).
Notes: Ascotaiwania hughesii was experimentally linked with the Helicoön farinosum asexual morph by Fallah et al. (1999). The authors examined the holotype of He. farinosum (Linder 1929) deposited in the Farlow Herbarium (FH) and concluded that the fungus observed in the holotype of A. hughesii in the juxtaposition to the ascomata and also formed in vitro is conspecific with He. farinosum. In the examined holotype of A. hughesii, consisting of a piece of a decorticated wood, the ascomata were scattered, mostly immersed with only the tip of their necks emerging, surrounded by effuse, creamy colonies of the asexual morph. We have not seen the holotype of He. farinosum, but we accept Fallah’s et al. (1999) conclusion.
A close relationship of a non-type strain of He. farinosum (DAOM 241947) with the ex-type strain of A. hughesii (isolate P2-6 = ILLS 53605, Campbell & Shearer 2004) was confirmed with DNA sequence data by Réblová et al. (2012). The species was positioned in the well-resolved Pleurothecium clade, unrelated to the Savoryellales, where other Ascotaiwania species resided (Boonyuen et al. 2011). Later, the order Pleurotheciales was introduced for this robust clade containing He. farinosum and its relatives (Réblová et al. 2016a). At that time, the generic placement of Helicoön was unclear pending confirmation of the phylogeny and classification of the type species He. sessile. Pfister (1997) isolated He. sessile from an Orbilia species, tentatively named O. luteorubella (Orbiliomycetes). However, its ITS1-5.8S sequence (U72605, Pfister 1997) shows 99 % similarity with the ITS sequences of numerous strains of Sarocladium kiliense and S. strictum of the Hypocreales (Sordariomycetes), an unlikely relationship suggestive of a contaminated or mislabelled culture. Other, recently available SSU-ITS-LSU sequences of He. sessile (KY659207 unpublished), a strain isolated from pond water in Austria, showed 98.84 % similarity with Orbilia luteorubella (H.B. 9705), thus attesting to the relationship between sexual and asexual morphs of Orbilia suggested by Pfister (1997).
Dayarathne et al. (2019) proposed the generic name Helicoascotaiwania typified by A. hughesii. However, the correct epithet for the type species of Helicoascotaiwania is “farinosa” since He. farinosum 1929 has a priority over A. hughesii 1999. Therefore, a new combination, along with full synonymy, is proposed in this study.
The ascomata of H. farinosa in the holotype were empty or contained only clusters of ascospores with their end cells partially collapsed. The condition of the type material did not allow us to examine the ascal apex and compare it with that of H. lacustris.
Helicoascotaiwania lacustris Réblová & J. Fourn., sp. nov. MycoBank MB832930. Fig. 19.
Fig. 19.
Helicoascotaiwania lacustris. A. Ascomata. B–D. Vertical sections of the ascomata. E. Ascomal wall. F. Asci with ascospores. G. Ascal apex with a prominent ascal plug (indicated by arrows). H–J. Ascal apex with a shallow, refractive apical ring (indicated by arrows). K, L. Ascospores. M. Paraphyses. A–M. On natural substrate. N. Colonies on MLA, OA and PCA after 4 wk. Images: A PRA-00016152, B–E PRA-00016151, F, L PRA-00016154, G–K, M PRA-00016153, N CBS 145963. Bars: A = 500 μm, B–D = 250 μm, E–M = 20 μm, N = 1 cm.
Typification: France, Haute-Garonne, Carbonne, SW of route du Lançon, artificial lake in a gravel pit, ca. 200 m a.s.l., on submerged wood of a branch of Populus sp., 4 Apr. 2017, J. Fournier J.F. 17013 (holotype PRA-00016153, culture ex-type CBS 145963 = MUCL 56486).
Etymology: Lacustre (Latin) of or relating to a lake, referring to the habitat of this species.
Description on the natural substrate: Sexual morph: Ascomata perithecial, non-stromatic, solitary or clustered in small groups, deeply immersed to semi-immersed becoming erumpent, black, pyriform to flask-shaped, glabrous, lying horizontally or obliquely beneath the wood surface, with a curved, lateral neck. Venter 470–750 μm high, 220–340 μm diam, ellipsoidal, laterally flattened, occasionally venter 250–360 μm diam and subglobose. Neck (80–)150–420 μm high, 130–170 μm diam, cylindrical, mostly lateral, occasionally central, apically slightly flared, immersed, rarely prominent; the surrounding substrate stained light brownish-grey to the depth of 1–2 mm. Ostiole periphysate. Ascomatal wall leathery, 34–45(–50) μm thick, two-layered; outer layer 20–30 μm thick, consisting of several rows of light brown cells 4.5–16 × 5–7 μm of textura angularis, the two outermost rows consisting of brown thick-walled cells with wall 1–2 μm thick; inner layer 10–15 μm thick, distinctly darker than the outer layer, consisting of dark brown flattened cells 5–22.5 × 3.5–4.5 μm of textura prismatica, inwardly lined by 1–3 rows of colourless thin-walled flattened cells. Wall at the base of the neck up to 90–100 μm thick, with outer layer thickened and outwardly more pigmented. Paraphyses filiform, hyaline, septate, not constricted at the septa, 2.5–6.5 μm wide, tapering to 1.5–2 μm, containing minute refractive droplets, deliquescing early. Asci 234–265 × 11–14.5(–16) μm (mean ± SD = 250 ± 11.1 × 12.8 ± 1.4 μm), 150−190 μm long (mean ± SD = 170 ± 11.1) in the sporiferous part, cylindrical, long-stipitate. Ascal apex obtuse with a prominent, chitinoid, non-amyloid pulvillus (5–)7.5–8.5 μm wide and 6.5–7.5 μm high deeply stained by diluted blue ink or toluidin blue, apically convex with a sharp upper rim, basally broadly cylindrical, with a wide tubular canal, obscuring a shallow refractive apical ring 4.5–5 × 1–1.5 μm revealed by phase contrast illumination and to a lesser extent in 3 % KOH. Ascospores (22.5–)24–31(–35.5) × 6.5–9(–9.5) μm (mean ± SD = 27.4 ± 1.6 × 7.9 ± 0.5 μm), fusiform, inequilateral, straight to slightly curved in the side view, unequally 3-septate, not constricted or slightly constricted at the septa, smooth-walled, versicolorous, the middle cells olivaceous brown to deep brown, filled by a large guttule and smaller droplets, end cells hyaline, shorter and obtusely to narrowly rounded; ascospores uniseriate in the ascus when fresh, becoming obliquely oriented and overlapping when dry, no appendages or mucilaginous sheath observed. Asexual morph: unknown.
Culture characteristics: Colonies on MLA 12–15 mm after 4 wk, circular, convex, margin entire, velvety, floccose, funiculose becoming smooth and mucoid at the margin, zonate, whitish-grey becoming sepia to ochre-beige towards the margin, with a paler outer zone, older cultures (>8 wk) becoming brown; reverse beige. Colonies on OA 14–16 mm after 4 wk, circular, flat, margin entire, mucoid-waxy, smooth, yellowish-beige centrally becoming creamy towards the margin; reverse beige. Colonies on PCA 12–14 mm after 4 wk, circular, flat, margin undulate to fimbriate, mucoid, smooth centrally, pale sepia-beige becoming paler towards the periphery; reverse creamy. Sporulation absent on all media.
Other specimens examined: France, Haute-Garonne, Avignonet-Lauragais, Marbail-Bas, Lac de Rosel, artificial lake in a gravel pit, ca. 188 m a.s.l., on submerged wood of a branch Populus sp., 16 Jan. 2007, J. Fournier J.F. 07010 (PRA-00016151); ibid., Carbonne, SW of route du Lançon, artificial lake in a gravel pit, ca. 200 m a.s.l., on submerged wood of a branch of Populus sp., 14 Aug. 2018, J. Fournier J.F. 18068 (PRA-00016154, culture CBS 145964); ibid., on submerged wood of a branch of Salix atrocinerea, 14 Aug. 2018, J. Fournier J.F. 18072 (PRA-00016155, culture CBS 146144); ibid., Martres-Tolosane, Balet, artificial lake in a gravel pit, ca. 256 m a.s.l., on submerged decorticated branch of Populus sp., 17 May 2008, J. Fournier J.F. 08131 (PRA-00016152).
Habitat and distribution: All specimens of H. lacustris originate from small artificial lakes in gravel pits in lowlands, strongly suggesting a preference for lentic habitats. In these lakes, water temperature can be high in summer. Submerged, decorticated twigs of the Salicaceae (mostly Populus) appear to be the regular host. The species is known in Europe in France so far.
Notes: Helicoascotaiwania lacustris differs from H. farinosa by anatomy of the ascomatal wall, shorter and broader asci, somewhat broader ascospores and the presence of a shallow refractive apical ring which is obscured by a prominent chitinoid pulvillus in the ascal apex. The asexual morph of H. lacustris is unknown. No conidia or conidiophores were formed on any of the used media, even after prolonged cultivation.
Ascomata of H. lacustris vary from subglobose to ellipsoidal, lying vertically or horizontally in the substrate. The neck is immersed, rarely emerged, most often opening flush with the host surface appearing as an ellipsoidal black dot up to 200 μm in the broadest place. The anatomy of the ascomatal wall of H. lacustris is unusual in this genus. Compared to H. farinosa whose ascomatal wall is composed of compressed brown cells darker on the outside (Fig. 18) (Fallah et al. 1999, fig. 11), the wall of H. lacustris is two-layered; the innermost rows of cells of the inner layer are composed of strongly flattened, thick-walled, brown cells which are significantly darker than the brown cells of the outer layer.
The ascal apex of H. lacustris contains two structures. The apical plug with a convex discoid apex and a broadly cylindrical base united by a canal that is apically occluded, and a shallow, refractive apical ring, usually obscured by the plug but clearly visible in empty or half-empty asci or with a phase contrast illumination (Fig. 19G–J). A similar configuration of the apical plug is commonly encountered in species referred to Ascotaiwania sensu lato. The size of the apical plug of H. farinosa is given nearly twice as big as that of H. lacustris, 9–13.5 μm fide Fallah et al. (1999). The refractive ring has never been reported for H. farinosa.
Kaseifertia Réblová, Hern.-Restr. & J. Fourn., gen. nov. MycoBank MB832924.
Etymology: The generic name is a tribute to our colleague and friend Keith A. Seifert for his contribution to mycology.
Type species: Kaseifertia cubense (R.F. Castañeda & G.R.W. Arnold) Réblová, Hern.-Restr. & J. Fourn.
Description: Asexual morph: Colonies effuse or with sporodochial conidiomata. Conidiophores semi-macronematous or micronematous, fasciculate, simple or branched, subhyaline. Conidiogenous cell integrated, terminal, monoblastic or polyblastic. Conidia dry, solitary, curved, clavate, pigmented, transversely septate, euseptate. Conidia secede schizolytically. Sexual morph: unknown.
Kaseifertia cubense (R.F. Castañeda & G.R.W. Arnold) Réblová, Hern.-Restr. & J. Fourn., comb. nov. MycoBank MB832925.
Basionym: Trichocladium cubense R.F. Castañeda & G.R.W. Arnold [as “cubensis”], Revta Jardín bot. Nac., Univ. Habana 6: 53. 1985.
Synonym: Bactrodesmium cubense (R.F. Castañeda & G.R.W. Arnold) Zucconi & Lunghini, Mycotaxon 63: 324. 1997.
Description: For description and illustration refer to Castañeda-Ruiz & Arnold (1985) and Zucconi & Lunghini (1997).
Habitat and distribution: Kaseifertia cubense occurs on fallen leaves of Coccoloba uviferae and leaf litter and decaying wood of Quercus ilex. The species is known in Middle America in Cuba and in Europe in Italy (Castañeda-Ruiz and Arnold, 1985, Zucconi and Lunghini, 1997).
Notes: The Blastn searches (GenBank accessed 23/10/2019) for possible relatives of a non-type strain of B. cubense CBS 680.96 (Zucconi & Lunghini 1997) using ITS, LSU, SSU and tef1-α sequences always showed this species nested in the Pleosporales but distantly related to all its members. Because of the lack of close relatives and new data, we follow the results of a phylogenetic analysis inferred from a combined dataset of ribosomal and protein-coding loci; B. cubense was resolved as a member of the suborder Massarineae and positioned on a separate branch as sister to the Morosphaeriaceae (Tanaka et al. 2015, fig. 1). Therefore, a new bactrodesmium-like genus Kaseifertia is introduced for B. cubense and a new combination is proposed.
In the protologue of K. cubense, Castañeda-Ruiz & Arnold (1985) described the species with effuse colonies on fallen leaves of Coccoloba uviferae in Cuba, while Zucconi & Lunghini (1997), who studied K. cubense on leaf litter of Quercus ilex and decaying wood in Italy, stated that the fungus formed sporodochia. Zucconi & Lunghini (1997) examined the type of K. cubense and concluded that the collections from Italy match the protologue in all other respects, and that specimens from Cuba and Italy are conspecific.
Neoascotaiwania Hern.-Restr., R.F. Castañeda & Guarro, Stud. Mycol. 86: 88. 2017.
Type species: Neoascotaiwania terrestris Hern.-Restr., R.F. Castañeda & Guarro, Stud. Mycol. 86: 90. 2017.
Notes: Based on phylogenies inferred from the LSU gene, Hernández-Restrepo et al. (2017) questioned the monophyly of Ascotaiwania and introduced a new genus Neoascotaiwania for N. terrestris, the type species, and N. limnetica (Chang et al., 1998, Réblová et al., 2016a). A third species, N. fusiformis (Yang et al. 2016), is assigned to the genus in this study based on the evidence from molecular DNA data. Neoascotaiwania was segregated from Ascotaiwania to accommodate morphologically similar fungi characterised by ascomata variably oriented on the host (upright, obliquely oriented or lying horizontally), 3-septate pigmented ascospores with hyaline end cells, asci with a smaller and shallow apical ring, only partially disintegrating paraphyses and asexual morphs forming effuse colonies of solitary, pigmented phragmoconidia.
Key to species of Neoascotaiwania
-
1a.
Conidia 2-septate, 29.5–38.5 × 18.5–25 μm…N. fusiformis
-
1b.
Conidia with more than two septa………………………..2
-
2a.
Conidia (3–)5–6-septate, (30–)33–41 × 15–17.5 μm……………………………………………………...N. limnetica
-
2b.
Conidia (2–)3–4(–5)-septate, 25.5–44.5 × 13–22 μm……………………………………………………...N. terrestris
Neoascotaiwania fusiformis (Jing Yang, Bhat & K.D. Hyde) Réblová, Hern.-Restr. & J. Fourn., comb. nov. MycoBank MB832931.
Basionym: Ascotaiwania fusiformis Jing Yang, Bhat & K.D. Hyde, Cryptog. Mycol. 37: 469. 2016.
Description: For description and illustrations refer to Yang et al. (2016).
Notes: Phylogenetic analyses of the combined ribosomal and protein-coding sequences of representatives of the Savoryellales support Ascotaiwania fusiformis as a member of the well-resolved Neoascotaiwania clade (Fig. 1, Fig. 2). Following these results, a new combination in the latter genus is proposed. Neoascotaiwania fusiformis is highly similar to N. limnetica and N. terrestris in forming dark, effuse colonies consisting of single, dry, dark brown, transversely septate conidia. Although the conidial size of all three Neoascotaiwania species somewhat overlaps, they can be distinguished by the number of septa.
Pleurotheciella Réblová, Seifert & J. Fourn., Mycologia 104: 1304. 2012.
Type species: Pleurotheciella rivularia Réblová, Seifert & J. Fourn., Mycologia 104: 1304. 2012.
Notes: Pleurotheciella (Réblová et al. 2012) accommodates freshwater, non-stromatic perithecial ascomycetes with minute, brown or black ascomata with a papilla or rostrate neck, disintegrating paraphyses, cylindrical-clavate asci with a distinct, non-amyloid apical annulus, hyaline, transversely septate ascospores, and brown or hyaline, macronematous conidiophores and hyaline, aseptate or septate conidia formed holoblastically on short denticles on sympodially elongating conidiogenous cells. Of the 12 known species of Pleurotheciella, sexual morphs have been reported for two other species only, P. centenaria (Réblová et al. 2012) and P. fusiformis (Luo et al. 2018). Members of the genus were collected on submerged decaying wood in lentic and lotic habitats in temperate, subtropical and tropical zones in Asia in China and Thailand, Europe in France, Melanesia in Papua New Guinea and North America in Canada (Matsushima, 1971, Réblová et al., 2012, Réblová et al., 2016a, Luo et al., 2018, Hyde et al., 2018).
Key to species of Pleurotheciella
-
1a.
Sexual morph unknown, conidiophores hyaline or brown, up to 390 μm long……………………………….2
-
1b.
Sexual morph known, conidiophores hyaline, up to 50 μm long……………………………………………….10
-
2a.
Conidiophores dark brown at the base becoming paler towards the tip…………………………………………….3
-
2b.
Conidiophores hyaline……………………………………9
-
3a.
Conidiophores up to 50 μm long………………………..4
-
3b.
Conidiophores 50 μm or longer…………………………6
-
4a.
Conidia 1-septate…………………………………………5
-
4b.
Conidia 0–3-septate, 15.5–17.5 × 3–4 μm, broadly lunate to suballantoid…………………………P. aquatica
-
5a.
Conidia 13–23 × 3–4 μm, broadly lunate……P. lunata
-
5b.
Conidia 10–14 × 2.5–3.5 μm, subcylindrical to obovoid…………………………………….P. saprophytica
-
6a.
Conidia aseptate, 25–28 × 5.5–6.5 μm, subcylindrical, slightly curved………………………………..P. submerse
-
6b.
Conidia 1-septate…………………………………………...7
-
7a.
Conidiophores up to 250 μm long………………………8
-
7b.
Conidiophores 250 μm or longer, conidia 19–25 × 4.5–6 μm, fusiform, subcylindrical to obovoid-subclavate……………………………………P. krabiensis
-
8a.
Conidia 12.5–16.5 × 3.5–4.5 μm, fusoid or slightly clavate, straight……………………………...P. uniseptata
-
8b.
Conidia 16–21 × 5.5–7 μm, narrowly obovoid or subclavate……………………………………………P. tropica
-
9a.
Conidia 3-septate, (14–)18–22.5 × 4–5.5 μm…………………………………………………………..P. centenaria
-
9b.
Conidia aseptate, 17–19 × 4–5 μm…………P. guttulata
-
10a.
Ascospores up to 5 μm wide……………………………11
-
10b.
Ascospores 5 μm or wider, 14.5–17.5(–18) × (5–)5.5–6(–6.5) μm, 3-septate, asci 103–116(–120) × 9–9.5 μm, conidia 12.5–16.5(–17.5) × 4.5–5 μm, 0–2-septate, ellipsoidal to obovoid…………...P. rivularia
-
11a.
Ascospores 3–5-septate, (19–)21–26.5(–30.5) × 4–5 μm, asci (84.5–)90–111 × 9–12(–13.5) μm, asexual morph unknown………………………………..P. erumpens
-
11b.
Ascospores 1-septate, 31.5–36.5 × 3.5–4.5 μm, asci 76–91 × 8–9 μm, conidia 16–18 × 3–4 μm, 0–1-septate, lunate to suballantoid………………P. fusiformis
Pleurotheciella erumpens Réblová & J. Fourn., sp. nov. MycoBank MB832932. Fig. 20.
Fig. 20.
Pleurotheciella erumpens. A, B. Ascomata. C. Vertical section of the ascoma. D–F. Asci with ascospores (in Melzer reagent). G, H. Asci beginning to swell (in water with Waterman blue ink). I. Paraphyses. J. Ascal apex with a refractive apical ring. K. Ascospores. A–K. On natural substrate. L. Colonies on MLA, OA and PCA after 6 wk. Images: A–C PRA-00016169, D, E, K PRA-00016171, F, I, L CBS 142447. Bars: A, B = 250 μm, C = 100 μm, D–K = 20 μm, L = 1 cm.
Typification: France, Ariège, Rimont, Las Muros, Peyrau brook, 410 m a.s.l., on submerged wood of a branch of a coniferous tree, 15 Sep. 2016, J. Fournier J.F. 16055 (holotype PRA-00016170, culture ex-type CBS 142447).
Etymology: Erumpens (Latin) meaning breaking or bursting out, referring to immersed ascomata that become gradually erumpent.
Description on the natural substrate: Sexual morph: Ascomata perithecial, non-stromatic, solitary or rarely aggregated, immersed, gradually erumpent, black, subglobose to ellipsoidal-oblong, frequently laterally or vertically flattened, with a flattened, usually less pigmented base, glabrous, vertical or lying horizontally in the substrate. Venter 130–200 μm high when subglobose, up to 420 μm high when ellipsoidal-oblong, 170–350 μm diam, with a rostrate to conical, central to eccentric papilla 40–60 μm high; the surrounding substrate stained light brownish-grey to a depth of 0.3–0.4 mm. Ostiole periphysate. Ascomatal wall leathery, fragile, 20–25 μm thick at sides, 30–35 μm thick at the apex, ca. 15 μm thick at the base, two-layered; outer layer composed of 2–3 layers of thick-walled, dark brown polyhedral cells with 1–2 μm thick wall of textura angularis to textura prismatica, inner layer of light brown, thin-walled elongated cells with 0.5–1 μm thick wall of textura prismatica, inwardly becoming subhyaline. Paraphyses abundant, septate, hyaline, thin-walled, 3.5–4.5(–6.5) μm wide, tapering apically to ca. 2 μm, longer than the asci. Asci (84.5–)90–111 × 9–12(–13.5) μm (mean ± SD = 101.4 ± 9.2 × 10.9 ± 0.7 μm), in the sporiferous part (71–)75–92(–94) μm long, unitunicate, cylindrical-clavate to slightly fusiform, 8-spored, apically obtuse, apical ring short-cylindrical to slightly wedge-shaped, non-amyloid, refractive, 2.5–3 μm wide, ca. 2 μm high, stained by diluted Waterman blue ink, Congo red or toluidin blue. Ascospores (19–)21–26.5(–30.5) × 4–5 μm (mean ± SD = 25.5 ± 2.6 × 4.6 ± 0.3 μm), fusiform slightly inequilateral with narrowly rounded ends, straight to slightly curved, hyaline, 3–5-septate, rapidly swollen and constricted at the septa when observed in water or lactic acid with Waterman blue ink, with a large guttule in each cell, smooth-walled, irregularly 2- to 3-seriate in the ascus, lacking a mucilaginous sheath or appendages. Asexual morph: unknown.
Culture characteristics: Colonies on MLA 11–12 mm after 6 wk, circular, flat, convex centrally, margin lobate, mucoid-waxy, glistening, smooth, somewhat funiculose and sparsely floccose on the inoculation block, dark brown becoming beige towards the margin, older cultures (>8 wk) becoming dark brown and submerged growth more prominent; reverse beige. Colonies on OA 16–17 mm after 6 wk, circular, flat, margin entire, mucoid, smooth, beige centrally, creamy becoming whitish at the margin; reverse creamy. Colonies on PCA 10–11 mm after 6 wk, circular, flat, margin lobate, mucoid, smooth, sepia centrally becoming beige towards the margin; reverse beige. Sporulation absent on all media.
Habitat and distribution: Pleurotheciella erumpens occurs on submerged decaying wood of various deciduous or coniferous trees such as Abies alba, Alnus glutinosa, Alnus incana, Fraxinus excelsior, Hedera helix and Sambucus nigra. It occurs exclusively in lotic habitats and seems to prefer acid or neutral water. So far, it is known from France and Spain, and it was collected at the altitude ranging from 400 to 1 400 m.
Other specimens examined: France, Ariège, Castelnau-Durban, L'Artillac brook, 410 m a.s.l., on submerged wood of a branch of Abies alba, 24 Jul. 2014, J. Fournier J.F. 14073 (PRA-00016166); ibid., Clermont, Le Pujol brook along D 119 road, 400 m a.s.l., on submerged wood of a branch of Fraxinus excelsior, 31 Jul. 2009, J. Fournier J.F. 09220 (PRA-00016164); ibid., Illier, Laramade, Vicdessos stream, 630 m a.s.l., on submerged wood of a branch of Hedera helix, 25 Nov. 2014, J. Fournier J.F. 14164 (PRA-00016168); ibid., Montségur, Le Lasset brook along D 9 road, ca. 800 m a.s.l., on submerged wood of a branch of Alnus glutinosa, 16 Nov. 2014, J. Fournier J.F. 14158 (PRA-00016167); ibid., Orlu, Jasse de Justuniac, Oriège stream, 1 200 m a.s.l., on submerged wood of a branch of Fraxinus excelsior, 29 Sep. 2015, J. Fournier J.F. 15133 (PRA-00016169); ibid., Rimont, Combelongue, Le Baup brook along D 18b road, 480 m a.s.l., on submerged wood of a branch of Fraxinus excelsior, 2 Dec. 2006, J. Fournier J.F. 06319 (PRA-00016160); ibid., Rimont, Le Baup brook along D 18b road, 510 m a.s.l., on submerged wood of a branch of Alnus glutinosa, 17 Nov. 2006 (incubated in moist chamber until 25 Nov. 2006), J. Fournier J.F. 06308 (PRA-00016159); ibid., Sainte-Croix-Volvestre, State Forest, Sabine brook, on submerged wood of a branch of Sambucus nigra, 23 Jul. 2009, J. Fournier J.F. 09210 (PRA-00016163); ibid., Ustou, Cirque de Cagateille, small stream, 1 150 m a.s.l., on submerged wood of a branch of Abies alba, 31 Aug. 2009, J. Fournier J.F. 09240 (PRA-00016165); ibid., Deux Sèvres, L'Hermitain, La Dame de Chambrille, on submerged wood of a branch of Sambucus nigra, 17 Apr. 2008, J. Fournier J.F. 08068 (PRA-00016161); ibid., Hautes-Pyrénées, Asque, La Gourgue, Arros brook, on submerged wood of a branch of Fraxinus excelsior, 29 May 2009, J. Fournier J.F. 09130 (PRA-00016162); ibid., Puy-de-Dôme, St Alyre d'Arlanc, Bois de Chelles, rivulet, 850 m a.s.l., on submerged wood of a branch of Abies alba, 22 Apr. 2019, J. Fournier J.F. 19012 (PRA-00016173); ibid., Savoie, Planay, Doron de Pralognan stream, Pont de Pierra, 1 207 m a.s.l., on submerged wood of a branch of Alnus incana, 17 Jun. 2018, J. Fournier J.F. 18028 (PRA-00016172). Spain, Asturias, Somiedo, La Farrapona, Carbonea, 1 400 m a.s.l., on submerged wood of a branch of Alnus glutinosa, 9 Jun. 2017, J. Fournier J.F. 17034 (PRA-00016171).
Notes: Pleurotheciella rivularia (Réblová et al. 2012) resembles P. erumpens in having 3-septate ascospores and asci of a comparable length, but differs by shorter and wider [14.5–17.5(–18) × (5–)5.5–6(–6.5) μm] ascospores and narrower (9–9.5 μm) asci. Pleurotheciella fusiformis (Luo et al. 2018) is distinguished from P. erumpens in having smaller (76–91 × 8–9 μm) asci and longer (31.5–36.5 μm), 1-septate, elongate-fusiform ascospores.
The ascomatal morphology of P. erumpens is highly variable. The ascomata are immersed to variously erumpent, a common feature of many aquatic ascomycetes. Their shape is ranging from subglobose to ellipsoidal-oblong with a central or eccentric to lateral papilla or rostrate neck. The soft hyaline neck observed in PRA-00016159 is likely related to the incubation in moist chamber at room temperature since we did not see this feature on the natural substrate.
Asci and ascospores of P. erumpens are consistent in length but vary in width, apparently concerning the mounting medium. We observed that asci and ascospores are rapidly swelling (asci up to 13–15 μm wide; ascospores up to 5–5.5 μm wide) in media containing Congo red or Waterman blue ink and they are slightly wider than those mounted in water, lactic acid, lactophenol with cotton blue or in Melzer reagent. The swollen ascospores become also constricted at the septa. In Fig. 20G–H is captured a moment when ascospores and asci begin to swell in a medium with Waterman blue ink. On the other hand, the asci mounted in Melzer reagent in Fig. 20D–F exhibit the original “non-swollen” condition.
Pleurotheciella erumpens occurs on wood of both deciduous and coniferous trees, which is most unusual in aquatic ascomycetes. The two other common species sharing this lack of host specificity known to us are Jahnula aquatica and “Trematosphaeria” hydrela of the Dothideomycetes.
Other excluded species of Bactrodesmium or species of uncertain status
Although the majority of Bactrodesmium is morphologically well characterised, we lack DNA sequence data to demonstrate their phylogenetic relationships. Moreover, only a handful of species exists in axenic culture. The systematics of Bactrodesmium is also complicated by the fact that many species exist in a single exemplar and they were not seen or recollected since the mycological authorities described them. Based on published data and our results, bactrodesmium-like phenotypes occur in several unrelated groups. Since morphology exhibits only one side of the coin and may not be indicative of phylogenetic relationships, we have not completed a revision of types. The thorough revision of the types should follow the recollection of individual species, which should be obtained in pure culture and studied using DNA sequence data. Following the present narrower delimitation of Bactrodesmium, several species and varieties were excluded from the genus and are listed below. Accepted names are written in bold. They include species with effuse colonies or synnemata or sporodochial species that were transferred to other genera in unrelated groups or whose systematic placement remains unknown. Their hosts, substrates and current taxonomic treatment are summarised in Table 3, including those taxonomically reassessed in this study.
Table 3.
Disposition of Bactrodesmium species which are not accepted in the genus (E = effuse colonies, S = sporodochium, SYN = synnema).
Name in Index Fungorum | Colony | Substrate and host of the type | Current name | Current ordinal position | Reference |
---|---|---|---|---|---|
Bactrodesmium gabretae | S | needles of Picea abies | Aphanodesmium gabretae | Helotiales | Koukol & Kolářová (2010), This study |
B. caulincola var. caulincola | E | herbaceous stem of the Apiaceae | Clasterosporium caulincola | Magnaporthales | Saccardo (1886) |
B. caulincola var. pellucidum | E | herbaceous stem | Camposporium pellucidum | Pleosporales | Hughes (1951) |
B. coryphae | E | fallen leaves of Corypha sp. | B. coryphae | Unknown | Sydow & Sydow (1920) |
B. cubense | E/S | fallen leaves of Cocoloba uvifera | Kaseifertia cubense | Pleosporales | Tanaka et al. (2015), This study |
B. clavulatum | E | bark of Eucalyptus sp. | Polyschema clavulatum | Pleosporales | Ellis (1976) |
B. fasciculare | E | wood of Betula alba | Pleotrichocladium opacum | Pleosporales | Hernández-Restrepo et al. (2017) |
B. fusiforme | S | beech test blocks | B. fusiforme | Unknown | Udaiyan (1991), Nom. inval., Arts 40.1, 40.3 |
B. heimii | SYN | on old ant nest | B. heimii | Unknown | Ciferri (1962) |
B. indicum | S | beech test blocks | B. indicum | Unknown | Udaiyan (1991), Nom. inval., Arts 40.1, 40.3 |
B. longisporum | SYN/S | wood of Alnus sp. | Gamsomyces longisporus | Sclerococcales | This study |
B. masonii | S | cupule of Fagus sylvatica | Bactrodesmiella masonii | Unknown | Ellis (1959) |
B. mastigophorum | E | living leaves of Parashoria plicata | B. mastigophorum | Unknown | Sydow & Sydow (1920) |
B. microleucurum | E | dead culms of Chusquea cummingii | B. microleucurum | Unknown | Ellis (1965) |
B. obliquum var. suttonii | S | bark of Pseudotsuga menziesii | Stuartella suttonii | Dothideomycetes inc. sed. | Funk & Shoemaker (1983) |
B. opacum | E | wood of Cedrus sp. | Ellisembia opaca | Sordariomycetes inc. sed. | Subramanian (1992) |
B. papyricola | E | paper | B. papyricola | Unknown | Ellis (1959) |
B. rahmii | S | dead branch of Picea sitchensis | B. rahmii | Unknown | Ellis (1976) |
B. robustum | S | bark of Acer sp. | Stigmina robusta | Capnodiales | Sutton (1973) |
B. stilboideum | SYN | fallen leaves of Calyptronoma plumeriana | Gamsomyces stilboideus | Sclerococcales | This study |
Remark: Species names given in bold are taxonomic novelties.
Bactrodesmiella masonii (S. Hughes) M.B. Ellis, Mycol. Pap. 72: 14. 1959.
Basionym: Bactrodesmium masonii S. Hughes, Can. J. Bot. 31: 654. 1953.
Notes: Bactrodesmium masonii is unique among other species of the genus by forming conidia singly or in short basipetal chains on percurrently elongating conidiogenous cells. Based on these diagnostic characters, Ellis (1959) introduced a new genus Bactrodesmiella typified by B. masonii.
Bactrodesmium coryphae Syd. & P. Syd., Annls mycol. 18: 103. 1920.
Notes: The species is known from a single collection made on fallen leaves of Corypha sp. in Philippines (Sydow & Sydow 1920). It is characterised by oblong, brown, 2–3-septate conidia arising from tips of branched hyphae that form effuse, olivaceous black colonies densely covering the substrate surface.
Bactrodesmium fusiforme Udaiyan [as “fusiformis”], J. Econ. Taxon. Bot. 15: 634. (1992) 1991. (Nom. inval., Arts 40.1, 40.3)
Notes: The species was described from beech test blocks in cooling towers from India, however it was not validly published as no type has been indicated (Udaiyan 1991).
Bactrodesmium heimii Cif. [as “heimi”], Atti Ist. bot. Univ. Lab. crittog. Pavia, sér. 5, 19: 93. 1962.
Notes: Bactrodesmium heimii was collected in galleries of an old ant nest of Reticulitermes lucifugus in the rotten trunk of Quercus suber in Sardinia (Ciferri 1962). Based on the conidiophore and conidium morphology given in the protologue and illustration provided earlier by Heim et al. (1951) based on French material, this species is remarkably similar to Phragmocephala, a polyphyletic dematiaceous synnematal hyphomycete currently placed in the Pleosporales (Su et al., 2015, Hernández-Restrepo et al., 2017) and Pleurotheciales (Réblová et al. 2016a).
Bactrodesmium indicum Udaiyan [as “indica”], J. Econ. Taxon. Bot. 15: 632. (1992) 1991. (Nom. inval., Arts 40.1, 40.3)
Notes: The species was described from beech test blocks in cooling towers from India, however it was not validly published as no type was indicated (Udaiyan 1991).
Bactrodesmium mastigophorum Syd. & P. Syd., Annls mycol. 18: 103. 1920.
Notes: This species is known only from the original locality in the Philippines. It forms effuse colonies on living leaves of Parashoria plicata and brown, septate conidia terminating in a long, apical flagellum born on short hyphae (Sydow & Sydow 1920).
Bactrodesmium microleucurum (Speg.) M.B. Ellis, Mycol. Pap. 103: 37. 1965.
Basionym: Coniosporium microleucurum Speg., Boln Acad. nac. Cienc. Córdoba 25: 112. 1921.
Notes: The species is known only from the holotype collected on dry, dead culms of a grass Chusquea cummingii in Chile. It forms effuse colonies and brown transversely septate conidia with dark bands at the septa and the apical cell often larger than the other cells (Ellis 1965).
Bactrodesmium papyricola C. Moreau & M. Moreau ex M.B. Ellis, Mycol. Pap. 72: 3. 1959.
Notes: This species is known only from the type made on a paper in French Guinea. It is characterised by effuse colonies and ovoid, brown, transversely septate conidia that become progressively paler towards the base and have a thick band at the septum near the apex (Moreau and Moreau, 1957, Ellis, 1959).
Bactrodesmium rahmii Ellis, More dematiaceous Hyphomycetes: 68. 1976.
Notes: This species is known so far from coniferous hosts, Picea sp. in Switzerland (holotype) (Ellis 1976) and P. sitchenis in Canada (Hughes & White 1983i). It is characterised by sporodochia and distoseptate conidia, occasionally with oblique or longitudinal septa in the apical cells. Conidia are seceding rhexolytically. Considering the distant relationship between Bactrodesmium (Savoryellales) with euseptate conidia and its segregate Aphanodesmium gabretae (Helotiales) having distoseptate conidia, B. rahmii is not accepted in the genus until its systematic position is verified with DNA data.
Camposporium pellucidum (Grove) S. Hughes, Mycol. Pap. 36: 9. 1951.
Basionym: Bactrodesmium caulincola var. pellucidum Grove, J. Bot., 24: 200. 1886.
Synonym: Clasterosporium caulincola var. pellucidum (Grove) Sacc. & Traverso, Syll. fung. 19: 304. 1910.
Notes: Hughes (1951) reviewed the genus Camposporium (Pleosporales), introduced by Harkness (1884), and proposed a new combination C. pellucidum based on Bactrodesmium caulincola var. pellucidum. The species is characterised by effuse colonies and transversely septate, cylindrical-fusiform, pigmented conidia terminating in a subulate, hyaline extension and arising holoblastically from short denticles on sympodially elongating conidiogenous cells. It occurs on herbaceous stems, decaying leaves, wood, cupules of Fagus sylvatica and also fruits of Aesculus hippocastanum, occasionally conidia were observed in stream foam (Hughes, 1951, Grove, 1886, Patil, 1998).
Clasterosporium caulincola (Corda) Sacc., Syll. fung. 4: 393. 1886.
Basionym: Sporidesmium caulincola Corda, in Sturm, Deutschl. Fl., 3 Abt. (Pilze Deutschl.) 2: 43. 1829.
Synonym: Bactrodesmium caulincola (Corda) Grove, J. Bot. 24: 200. 1886.
Notes: The species forms effuse colonies on dead herbaceous stems and brown, fusiform, transversely septate conidia lacking apical flagellum or extension. The species is currently classified in the genus Clasterosporium, a member of the Magnaporthales (Zhang et al. 2016).
Ellisembia opaca (Cooke & Harkn.) Subram., Proc. Indian natn Sci. Acad., Part B. Biol. Sci. 58: 184. 1992.
Basionym: Bactrodesmium opacum Cooke & Harkn., Grevillea 12: 95. 1884.
Synonyms: Clasterosporium harknessii Sacc., Syll. fung. 4: 385. 1886.
Sporidesmium harknessii (Sacc.) M.B. Ellis, Mycol. Pap. 70: 24. 1958.
Notes: Synonymy according to Subramanian (1992). In his survey of Sporidesmium and related taxa, Subramanian (1992) introduced Ellisembia and cited E. opaca among 12 accepted species. Ellisembia is a polyphyletic genus, some of its species are members of the Chaetosphaeriales, while others are nested in the Sordariomycetidae as an incertae sedis lineage; the systematic placement of the type species E. coronata remains unknown.
Pleotrichocladium opacum (Corda) Hern.-Restr., R.F. Castañeda & Gené, Stud. Mycol. 86: 75. 2017.
Basionym: Sporidesmium opacum Corda, Icon. fung. 1: 7. 1837.
Synonyms: Xenodochus opacus (Corda) Bonord., Handb. Allgem. mykol.: 49. 1851.
Clasterosporium opacum (Corda) Sacc., Syll. fung. 4: 387. 1886.
Trichocladium opacum (Corda) S. Hughes, Trans. Br. mycol. Soc. 35: 154. 1952.
Sporidesmium fasciculare Corda, Icon. fung. 1: 7. 1837.
Dicoccum fasciculare (Corda) Bonord., Handb. Allgem. mykol.: 48. 1851.
Clasterosporium fasciculare (Corda) Sacc., Syll. fung. 4: 387. 1886.
Bactrodesmium fasciculare (Corda) E.W. Mason & S. Hughes, in Walsh & Rimington, Nat. Hist. Scarborough Distr. 1: 159. 1953. (Nom. inval., Art. 41.5)
Notes: Synonymy according to Hughes (1952) and Ellis (1959). For more information and phylogeny refer to Hernández-Restrepo et al. (2017). For taxonomic placement of B. fasciculare sensu Mason & Hughes (1953) see notes under B. obovatum.
Polyschema clavulatum (Cooke & Harkn.) M.B. Ellis [as “clavulata”], More Dematiaceous Hyphomycetes: 370. 1976.
Basionym: Bactrodesmium clavulatum Cooke & Harkn., Grevillea 12: 92. 1884.
Synonyms: Clasterosporium clavulatum (Cooke & Harkn.) Sacc., Syll. fung. 4: 390. 1886.
Stigmina clavulata (Cooke & Harkn.) Pound & Clem., Minn. bot. Stud. 1(Bulletin 9): 661. 1896.
Notes: The species is known so far in the USA on decorticated wood of Eucalyptus. It is characterised by effuse colonies and pigmented, transversely septate conidia borne on monotretic conidiogenous cells. Based on these morphological traits, Ellis (1976) excluded B. clavulatum from the genus and proposed a combination in Polyschema.
Stigmina robusta (Cooke & Ellis) B. Sutton, Mycol. Pap. 132: 117. 1973.
Basionym: Arthrobotryum robustum Cooke & Ellis, Grevillea 7: 7. 1878.
Synonyms: Wettsteiniella robusta (Cooke & Ellis) Kuntze, Revis. gen. pl. 2: 875. 1891.
Bactrodesmium robustum (Cooke & Ellis) S. Hughes, Can. J. Bot. 36: 739. 1958.
Notes: The present species occurs on decaying bark of Acer sp. and Populus spp. and it is known from North America in Canada and the USA (Hughes, 1958, Sutton, 1973). It is characterised by superficial or semi-immersed sporodochia, monoblastic conidiogenous cells that are almost cupulate with a ragged, flared annellation and pigmented, transversely septate conidia with inconspicuous marginal frill. Based on these features, Sutton (1973) excluded this species from Bactrodesmium and proposed a new combination in Stigmina.
Stuartella suttonii A. Funk & Shoemaker, Can. J. Bot. 61: 2277. 1983.
Synonym: Bactrodesmium obliquum var. suttonii S. Hughes & G.P. White, Fungi Canadenses 254: 1. 1983.
Notes: Hughes & White (1983b) described B. obliquum var. suttonii from the West coast of Canada from various coniferous trees except Picea spp., which is restricted as a host of the type variety of B. obliquum (Sutton, 1967, Hughes and White, 1983e). Both varieties produce sporodochia; the var. suttonii differs from var. obliquum by the absence of longitudinal or oblique septa in the end cells of conidia. The connection between Stuartella suttonii and B. obliquum var. suttonii was experimentally confirmed by Funk & Shoemaker (1983); the species is a member of the Dothideomycetes genera incertae sedis. Bactrodesmium obliquum var. obliquum is accepted in the genus until its phylogenetic relationships are determined. Its sexual-asexual connection remains unknown.
Discussion
The five-gene phylogenetic analyses (Fig. 1, Fig. 2) revealed Bactrodesmium, including B. abruptum, B. diversum, B. leptopus, B. obovatum, B. pallidum and B. spilomeum, as a well-resolved monophyletic clade in the Savoryellales. Bactrodesmium has been a broadly delimited genus encompassing saprobes on decaying wood and bark, palm rachis and fallen leaves or paper but also epiphytes on living leaves in temperate, subtropical and tropical regions of Southern and Northern hemispheres (e.g. Sydow and Sydow, 1920, Ellis, 1959, Ellis, 1963, Ellis, 1965, Ciferri, 1962, Holubová-Jechová, 1972, Sutton, 1977, Hughes, 1978, Palm and Stewart, 1982, Hughes, 1983, Hughes and White, 1983a, Hughes and White, 1983b, Hughes and White, 1983c, Hughes and White, 1983d, Hughes and White, 1983e, Hughes and White, 1983f, Hughes and White, 1983g, Hughes and White, 1983h, Hughes and White, 1983i, Rao, 1983, Castañeda-Ruiz, 1985, Kirk, 1985, Kirk, 1986, Matsushima and Matsushima, 1995, Mercado et al., 1995, Cooper, 2005). Based on the phylogenetic evidence and comparative morphology of six species characterised in this study, the generic concept of Bactrodesmium was emended. The genus is delimited to dematiaceous hyphomycetes forming sporodochial conidiomata in the substrate, fasciculate, simple or sparsely or penicillately branched mononematous conidiophores, holoblastic conidiogenous cells and solitary, dry, acrogenous, pigmented conidia sometimes with thick bands over transverse septa. Conidiophores are usually hyaline to subhyaline to pale brown and thin-walled, but in some species, they are brown to dark brown or reddish-brown and thick-walled, i.e. B. globosum (Holubová-Jechová 1972). Although longitudinal or oblique septa are unusual in Bactrodesmium, species with dictyoconidia such as B. obliquum, B. peruvianum and B. pithoideum (Sutton, 1967, Sutton, 1975, Sutton, 1977), are accepted in the genus until their systematic placement is determined with DNA sequence data. All 35 accepted species are saprobes thriving on decaying wood or bark of deciduous or coniferous trees, rarely on dead palm rachis except for B. novageronense, which forms conidiomata on fallen leaves.
Of the five gene markers used to assess relationships of Bactrodesmium, only three possess species resolving power. The ITS region, a standard DNA barcode for fungi, which, however, may not always contain enough variation for discriminating among all species (Schoch et al. 2012), was insufficient to identify all studied Bactrodesmium. We encountered difficulties in distinguishing between B. abruptum and B. obovatum; their ITS loci exhibited high sequence identity but also polymorphism among strains of each species. The intragenomic ITS variation has been reported for various fungal groups (e.g. O’Donnell and Cigelnik, 1997, Hibbett et al., 2011, Hughes et al., 2018, Stadler et al., 2020), which can make identification, interpretation of phylogenies and taxonomic conclusions based solely on this marker problematic. Only protein-coding loci, rpb2 and tef1-α, could distinguish among all six Bactrodesmium. The tef1-α locus is relatively easy to amplify, which makes it slightly superior to rpb2, which in turn may be difficult to amplify. Thus, the tef1-α gene, which has been suggested the universal secondary fungal barcode (Robert et al., 2011, Stielow et al., 2015), is suitable as a secondary identification marker for Bactrodesmium.
The conidiogenous cells of Bactrodesmium are described as either polyblastic (B. betulicola, B. diversum, B. globosum and B. hebridense) or monoblastic (B. abruptum, B. ellipsoideum, B. indicum, B. leptopus, B. obovatum, B. pallidum, B. spilomeum, B. ramosius, B. simile, B. traversoanum and B. xerophilum), but often this diagnostic character is omitted from the descriptions. However, only B. betulicola (Holubová-Jechová 1972) and B. pithoideum (Sutton 1975) form conidia on bluntly rounded denticles on polyblastic, sympodially elongating conidiogenous cells, an unusual character confirmed by Hughes and White, 1983f, Hughes and White, 1983g in Canadian material of these species. Moreover, B. pithoideum forms either sporodochia or the colonies are effuse, scattered, sometimes pulvinate (Sutton, 1975, Hughes and White, 1983g). We prefer not to segregate the two latter species from Bactrodesmium until their placement is verified with DNA sequence data.
Determination of the mechanism of a conidial secession of Bactrodesmium is complicated by the fact that on the natural substrate conidia are released and often bear a minute frill of the wall at the base suggesting the rhexolytic secession, while in culture conidia do not secede readily. This variability is a source of inconsistent view of the detachment of conidia and the reason it was considered both schizolytic and rhexolytic. Moreover, descriptions of many Bactrodesmium are based on observations on the natural material only and the mode of conidial secession is unknown. Species of Bactrodesmium with a rhexolytic detachment include B. biformatum, B. cedricola, B. curvatum, B. diversum, B. hebridense, B. linderi, B. mucosum, B. palmicola, and B. simile (Ellis, 1963, Palm and Stewart, 1982, Hughes, 1983, Hughes and White, 1983h, Kirk, 1985, Kirk, 1986, Matsushima and Matsushima, 1995, Mercado et al., 1995, Hernández-Restrepo et al., 2013, Arias et al., 2016). Bactrodesmium species reported to have schizolytic secession are B. betulicola, B. moenitum, B. nothofagi, B. obovatum, B. pithoideum, B. pluriseptatum, and B. pusillum (Palm and Stewart, 1982, Hughes and White, 1983a, Hughes and White, 1983f, Hughes and White, 1983g, Hughes, 1984, Révay, 1993, Cooper, 2005, Markovskaja, 2006). Moreover, Hughes & White (1983a) considered the basal frill in conidia of B. obovatum as a result of the mechanical rupture of the conidiogenous cell rather than an indication of rhexolytic detachment. On the contrary, Hughes (1983) and Hughes & White (1983h) regarded the presence of a minute frill in conidia of B. biformatum and B. cedricola significant, and the secession was described as rhexolytic. These examples illustrate the difficulty to define the mode of conidial detachment in Bactrodesmium.
Conidia with a frill of the wall at the base were frequently observed in our specimens, while in culture the conidia usually remained attached indicating that the natural mechanism of segregation is often not completing. When detached, conidia with and without a noticeable frill were present. Multiple secession patterns of several Bactrodesmium are captured in vitro in Fig. 5 and described above. During rhexolytic secession, the conidiogenous cells or specialised supporting cells below conidium may degenerate enzymatically, or may fracture at the built-in zone of weakness or are thinner-walled than the cells above and below them and collapse (Carmichael, 1971, Cole and Samson, 1979). Based on our observations we conclude that the secession of conidia of Bactrodesmium sensu stricto is rhexolytic. However, the conidial secession varies in bactrodesmium-like species that belong to distantly related groups, i.e. A. gabretae (rhexolytic), B. obliquum var. suttonii (as Stuartella suttonii) (rhexolytic), or G. longisporus and G. stilboideus (schizolytic) and K. cubense (schizolytic). It seems that the mode of conidial detachment is taxonomically significant. Cultivation studies and re-evaluation of the mode of conidial secession in Bactrodesmium is needed to evaluate a taxonomic significance of conidial separation.
In the morphology of brown, transversely septate, solitary conidia, Bactrodesmium is similar to Bactrodesmiastrum, Bactrodesmiella, Janetia, Listeromyces and Vanakripa. Bactrodesmiastrum (Fuscosporellales) is a small genus containing five species characterised by effuse colonies, pigmented, macronematous, sometimes moniliform conidiophores and holoblastic, terminal, integrated or discrete usually pigmented conidiogenous cells (Holubová-Jechová, 1984, Hernández-Restrepo et al., 2015, Li et al., 2017). Members of Bactrodesmiella (Ellis 1971) occur on litter or decaying bark and differ from Bactrodesmium by percurrently elongating conidiogenous cells and conidia arranged in short chains; its systematic placement is unknown. Janetia (Ellis 1976) includes species forming effuse colonies or indeterminate synnemata; conidiophores are often reduced to conidiogenous cells which are sympodially elongating with denticles bearing pigmented phragmoconidia. Listeromyces (Penzig & Saccardo 1902) is a monotypic genus whose conidiomata can be interpreted as either synnematal or sporodochial. It occurs on decaying wood and is characterised by conidiophores arising from a stromatic base and bearing short monoblastic conidiogenous cells with distoseptate conidia and phialidic synanamorph in vitro (Goos, 1971, Ellis, 1976). Vanakripa forms sporodochia on decaying wood and is distinctive by pigmented, septate or non-septate conidia which remain attached to the hyaline so called separating cell after rhexolytic secession (Bhat & Kendrick 1993).
In the absence of molecular DNA data, the classification of Bactrodesmium has always been challenging. The occurrence of bactrodesmium-like phenotypic traits in distinct clades implies that they are a result of convergent evolution, and the genus is polyphyletic. In this study, four species were segregated from Bactrodesmium into three unrelated genera, Aphanodesmium (Helotiales), Gamsomyces (Sclerococcales) and Kaseifertia (Pleosporales). Following the emended description of Bactrodesmium, phylogenetic evidence and morphological comparison of known species, several other species are not recognised in the genus (Table 3). Interestingly, the majority of excluded species with effuse colonies inhabit fallen or living leaves or herbaceous stems, while species accepted in Bactrodesmium are generally lignicolous. The substrate preference of species with synnemata is not unambiguous.
Bactrodesmium species, excluded from the genus and characterised by synnemata, include B. heimii, G. longisporus and G. stilboideus; G. longisporus forms also sporodochial conidiomata (Ellis, 1976, Chang, 1997, Heredia et al., 2018, this study). Due to the revealed relationship of G. longisporus and G. stilboideus as a new evolutionary lineage in the Sclerococcales, B. heimii, which is morphologically reminiscent of Phragmocephala, is not accepted in Bactrodesmium. On the other hand, we do not exclude the possibility that other synnematal species may be included in Bactrodesmium based on molecular evidence. The conidiomatal structures such as synnema and sporodochium, their anatomy, intermediate or transitional forms and importance in classification have been addressed several times. Concerning the presence of pseudoparenchymatous tissue at the base of the synnema, there can be no apparent difference between sporodochium and synnema. Sutton (1980) proposed an experimental classification system for coelomycetous fungi, which he based on the conidium-ontogeny system proposed earlier by Hughes (1953) and subsequently refined by Tubaki, 1958, Barron, 1968, and Cole & Samson (1979). He stated that different categories of conidiomata are continuous and indistinguishable from each other (Sutton 1980). In some species, conidiomata can be interpreted either as synnematal and/or sporodochial, e.g. in asexual morphs of Nectria. For example N. cinnabarina (asexual morph Tubercularia vulgaris) forms long, stipitate sporodochia interpreted as synnemata (Okada & Tubaki 1987), compared to N. pseudocinnabarina which forms only synnemata (Hirooka et al. 2012), while other Nectria form non-stipitate sporodochia. Sutton & Cole (1983) and Rao & de Hoog (1986) discussed the arrangement of conidiophores on the examples of Thozetella and B. longisporum and questioned the taxonomic value of sporodochium vs synnema concluding that under different environmental conditions this character may show remarkable variation.
Although we studied strains of several Bactrodesmium sensu stricto, the epitype was proposed only for B. diversum. Strains of other species do not come from the same country or region as the holotypes. The B. diversum holotype (Spain) and all newly collected strains (France) originate from the southwestern Pyrenees in the southern and northern parts of this mountainous region; localities are ca. 180 km apart. Thus, the French collections were suitable for selecting the epitype. Regarding A. cubense (Elba Island vs Cuba – holotype) and G. longisporus (India, Japan vs United Kingdom – holotype), the available strains are from different continents and cannot be considered eligible candidates. Although the strain of G. stilboideus (Puerto Rico) originates in Middle America in the Caribbean as well as the holotype (Cuba), it is not the most typical representative of this species. The conidia of our strain are slightly longer, wider and with more septa (see above) and expand the known variability of this species.
The genus Dematiosporium was revised to include lignicolous freshwater fungi forming effuse colonies and dictyosporous, dark brown conidia with pores at each cell. The genus is remarkably similar to Monodictys (Hughes 1958), typified by M. putredinis. Monodictys and Dematiosporium share several morphological traits such as effuse colonies without setae, micronematous conidiophores and single, dry, brown to black, dictyosporous conidia formed on the terminal, integrated, monoblastic conidiogenous cells (Hughes, 1958, Ellis, 1971). Although the majority of Monodictys are saprobes on decaying wood or plant debris in terrestrial, freshwater, seawater or brackish habitats and are cosmopolitan in distribution, some species, e.g. M. putredinis and Monodictys sp., were confirmed to induce soft rot (Eslyn et al., 1975, Eslyn and Highley, 1976, Udaiyan and Manian, 1991).
Monodictys putredinis, the asexual morph of Ohleria brasilensis (Samuels 1980), and seven other species (M. aershanensis, M. arctica, M. austrina, M. capensis, M. castaneae, M. nigrospermum, M. cf. pelagica), whose sequence data are available in GenBank are positioned in various families or incertae sedis clades in the Pleosporales and Sordariales (Day et al., 2006, Prasanna Kumar, 2013, Tanaka et al., 2015, Hernández-Restrepo et al., 2017, Vu et al., 2019). Relationships of other Monodictys species can be estimated through their life histories. Monodictys pelagica is the asexual morph of Nereiospora cristata (Microascales, Sordariomycetes) (Mouzouras & Jones 1985) and several other monodictys-like fungi were reported as asexual morphs of Aquastroma magniostiolata (Pleosporales) (Tanaka et al. 2015), Ascotaiwania latericolla and A. lignicola (Savoryellales) (Chang 2001, this study), Hyaloscypha monodictys (Helotiales, Leotiomycetes) (as H. albohyalina var. monodictys, Hosoya & Huhtinen 2002, see also Han et al., 2014, Fehrer et al., 2019) and Tubeufia amazonensis and T. cf. paludosa (Tubeufiales, Dothideomycetes) (Samuels et al. 1978). A phialidic synanamorph was reported for M. levis (incertae sedis) in vitro (Wiltshire 1938). The newly published occurrence of three monodictys-like species in the Savoryellales and the systematic placement of Monodictys s. str. and other monodictys-like fungi in several fungal classes demonstrate that the present generic concept is polyphyletic and strongly calls for targeted morphological and molecular phylogenetic studies needed to resolve the taxonomy of the genus.
Our combined five-gene phylogenetic analyses consistently show Bactrodesmium, Canalisporium, Dematiosporium, Neoascotaiwania and Savoryella as monophyletic strongly supported genera of the Savoryellales and together with morphological characters provide evidence to recognise them as separate taxa. Only Ascotaiwania cannot be resolved with the current sampling. In the survey of the Savoryellales, Dayarathne et al. (2019) proposed a broadly delimited Ascotaiwania, but the authors did not consider the diversity and taxonomic significance of asexual characters nor they analysed the ITS sequence data. Dayarathne et al. (2019) reduced Neoascotaiwania to the synonymy with Ascotaiwania and accepted Bactrodesmium (based on B. pallidum) in the latter genus by analysing the combined LSU-SSU-rpb2-tef1-α data. However, the nested position of a single species of Bactrodesmium in the Ascotaiwania clade merely demonstrated that the delimitation of Ascotaiwania may not correspond with a monophyletic genus and that application of the name requires much improved sampling.
Although the relationship of Ascotaiwania species included in the phylogenetic analysis seems clear when their ascospores, asci and ascomata are compared, it is difficult to reconcile their different asexual morphs with this relationship. Ascotaiwania latericolla and A. lignicola are the only species of the genus with dictyosporous conidia. The other Ascotaiwania were additionally linked to morphologically different monotosporella-, triadelphia- or trichocladium-like asexual morphs with phragmoconidia, i.e. A. hsilio (Chang 2001), A. mitriformis (Ranghoo & Hyde 1998), A. sawadae (Sivichai et al. 1998), and A. uniseptata (Réblová et al. 2016a). Given a close relationship of A. latericolla and A. lignicola, representing the core of the genus, the dictyosporous, pigmented, dry, solitary conidia may serve as a diagnostic character to recognise Ascotaiwania sensu stricto, and the asexual characters may play an important role in delimitation of the genus and its possible segregates. Because of the high degree of similarity in sexual morphological traits of Ascotaiwania and because of the lack of sequence data for majority of its species or insufficient DNA data that consists only of fragments of the LSU gene (A. uniseptata, A. mitriformis), we refrain from making any nomenclatural changes or proposing new genera based on limited sampling. Based on the current sampling of the Savoryellales, it became evident that sporodochial conidiomata (Bactrodesmium, Canalisporium) and effuse colonies (Ascotaiwania, Dematiosporium, Neoascotaiwania and Savoryella) are generic diagnostic characters.
Pleurotheciella erumpens and H. lacustris represent new additions to the Pleurotheciales. Pleurotheciella is remarkably similar to Pleurothecium (Höhnel 1919) in the morphology of the macronematous conidiophores, hyaline conidia borne on holoblastic denticulate conidiogenous cells seceding schizolytically, non-stromatic dark brown ascomata, cylindrical-clavate asci with a distinct apical annulus and hyaline, ellipsoidal to fusiform, transversely septate ascospores. Although the first observations of dactylaria-like conidiophores of Pleurotheciella were made only in vitro; conidiophores were hyaline, often reduced to conidiogenous cells (Réblová et al. 2012), species subsequently added to the genus were confirmed to produce macronematous, brown or hyaline conidiophores on the natural substrate (Réblová et al., 2016a, Luo et al., 2018).
Helicoascotaiwania, typified by H. farinosa, was segregated from Ascotaiwania (Savoryellales) by coiled conidia of the Helicoön-type and DNA sequence data (Campbell and Shearer, 2004, Boonyuen et al., 2011, Réblová et al., 2012, Réblová et al., 2016a, Dayarathne et al., 2019). It is the only member of the Pleurotheciales with this kind of conidial morphology. Helicoascotaiwania forms a well-resolved clade in the five-gene phylogeny and is distinguished from other genera of the order by versicolorous, septate ascospores, and asci with a prominent ascal plug obscuring the apical ring. Our new species H. lacustris is the first member of the genus reported from Europe.
Acknowledgements
This study was supported by long-term research development projects of the Institute of Botany, Czech Academy of Sciences RVO 67985939 (M.R.) and the University Hospital Hradec Králové MH CZ – DRO (UHHK, 00179906) (J.N.). We thank Keith Seifert for a discussion on the rhexolytic conidiogenesis and conidiogenesis in general. We thank the curators of ILLS and K herbaria, Andrew N. Miller and Angela Bond, for the loan of specimens. Peter Johnston is acknowledged for his assistance to M. R. in obtaining the Manaaki Whenua Fellowship in 2005 and collecting permit for New Zealand. We are grateful to Ken Hudson from CABI (Mycology Publications) for providing necessary literature. We thank the French Ministry of Environment for assistance in obtaining the collecting permit for France. We thank Václav Štěpánek for preparing several Bactrodesmium sequences during preparation of this study. We thank Shaun Pennycook for grammatical review of new names and reviewers for their comments and suggestions.
Footnotes
Peer review under responsibility of Westerdijk Fungal Biodiversity Institute.
References
- Arias R.M., Heredia G., Castañeda-Ruiz R.F. Two new species of Bactrodesmium and Dictyoaquaphila from Mexico. Mycotaxon. 2016;131:291–295. [Google Scholar]
- Barbosa F.R., Gusmão L.F.P. Conidial fungi from semi-arid Caatinga Biome of Brazil. Rare freshwater hyphomycetes and other new records. Mycosphere. 2011;2:475–485. [Google Scholar]
- Barron G.L. Williams & Wilkins Co.; Baltimore, USA: 1968. The genera of hyphomycetes from soil. [Google Scholar]
- Berkeley M.J., Broome C.E. Notices of British fungi (1038–1062) Annals and Magazine of Natural History, Ser. 3. 1865;15:400–404. [Google Scholar]
- Bhat D.J., Kendrick W.B. Twenty-five new conidial fungi from the Western Ghats and the Andaman Islands (India) Mycotaxon. 1993;49:19–90. [Google Scholar]
- Boonyuen N., Suetrong S., Sivichai S., et al. Savoryellales (Hypocreomycetidae, Sordariomycetes): a novel lineage of aquatic ascomycetes inferred from multiple-gene phylogenies of the genera Ascotaiwania, Ascothailandia, and Savoryella. Mycologia. 2011;103:1351–1371. doi: 10.3852/11-102. [DOI] [PubMed] [Google Scholar]
- Cai L., Zhang K., McKenzie E.H., et al. Freshwater fungi from bamboo and wood submerged in the Liput River in the Philippines. Fungal Diversity. 2003;13:1–12. [Google Scholar]
- Campbell J., Shearer C.A. Annulusmagnus and Ascitendus, two new genera in the Annulatascaceae. Mycologia. 2004;96:822–833. doi: 10.1080/15572536.2005.11832929. [DOI] [PubMed] [Google Scholar]
- Carmichael J.W. In: Taxonomy of fungi imperfecti. Kendrick B., editor. Univ. Toronto Press; Toronto, Ontario: 1971. Blastospores, aleuriospores, chlamydospores; pp. 50–65. [Google Scholar]
- Castañeda-Ruiz R.F. Instituto de investigacions Fundamentales en Agricultura Tropical - Alejandro de Humboldt; Cuba: 1985. Deuteromycotina de Cuba. II. Hyphomycetes. [Google Scholar]
- Castañeda-Ruiz R.F., Arnold G.R.W. Deuteromycotina de Cuba. I. Hyphomycetes. Revista del Jardín Botánico Nacional. 1985;6:47–67. Universidad de la Habana. [Google Scholar]
- Castañeda-Ruiz R.F., Guerrero B., Adamo G.M., et al. A new species of Selenosporella and two microfungi recorded from a cloud forest in Mérida, Venezuela. Mycotaxon. 2009;109:63–74. [Google Scholar]
- Castañeda-Ruiz R.F., Heredia G., Gusmao L.F.P., et al. In: Biology of microfungi. De-Wei L., editor. Springer International Publishing; Switzerland: 2016. Fungal diversity of Central and South America; pp. 197–218. [Google Scholar]
- Castlebury L.A., Rossman A.Y., Sung G.H., et al. Multigene phylogeny reveals new lineage for Stachybotrys chartarum, the indoor air fungus. Mycological Research. 2004;108:864–872. doi: 10.1017/s0953756204000607. [DOI] [PubMed] [Google Scholar]
- Chang H.S. Eight more dematiaceous hyphomycetes new for Taiwan. Botanical Bulletin- Academia Sinica. 1997;38:197–204. [Google Scholar]
- Chang H. Trichocladium anamorph of Ascotaiwania hsilio and Monodictys-like anamorphic states of Ascotaiwania lignicola. Fungal Science. 2001;16:35–38. [Google Scholar]
- Chang H.S., Hsieh S.Y., Jones E.B.G., et al. New freshwater species of Ascotaiwania and Savoryella from Taiwan. Mycological Research. 1998;102:709–718. [Google Scholar]
- Cheng X.-L., Li W., Zhang T.-Y. A new species of Phaeoisaria from intertidal marine sediment collected in Weihai, China. Mycologia. 2014;127:17–24. [Google Scholar]
- Chew H.F., Jungkind D.L., Mah D.Y., et al. Post-traumatic fungal keratitis caused by Carpoligna sp. Cornea. 2010;29:449–452. doi: 10.1097/ICO.0b013e3181af3954. [DOI] [PubMed] [Google Scholar]
- Ciferri R. Schedae mycologicae 35–98. Atti dell'Istituto Botanico della Università e Laboratorio Crittogamico di Pavia, Sér. 5. 1962;19:85–139. [Google Scholar]
- Cole G.T., Samson R.A. Pitman Publishing Limited; London, England: 1979. Patterns of development in conidial fungi. [Google Scholar]
- Cooke M.C. Saccardo’s sylloge fungorum. Grevillea. 1883;12:34–35. [Google Scholar]
- Cooper J.A. New Zealand hyphomycete fungi: additional records, new species, and notes on interesting collections. New Zealand Journal of Botany. 2005;43:323–349. [Google Scholar]
- Crous P.W., Verkley G.J.M., Groenewald J.Z., et al. Westerdijk Fungal Biodiversity Institute; Utrecht, The Netherlands: 2019. Fungal biodiversity. Westerdijk Laboratory Manual Series 1. [Google Scholar]
- Day M.J., Gibas C.F.C., Fujimura K.E., et al. Monodictys arctica, a new hyphomycete from the roots of Saxifraga oppositifolia collected in the Canadian High Arctic. Mycotaxon. 2006;98:261–272. [Google Scholar]
- Dayarathne M.C., Maharachchikumbura S.S.N., Jones E.B.G., et al. Phylogenetic revision of Savoryellaceae and evidence for its ranking as a subclass. Frontiers in Microbiology. 2019;10:1–26. doi: 10.3389/fmicb.2019.00840. [DOI] [PMC free article] [PubMed] [Google Scholar]
- de Hoog G.S., Gerrits van den Ende A.H. Molecular diagnostics of clinical strains of filamentous Basidiomycetes. Mycoses. 1998;41:183–189. doi: 10.1111/j.1439-0507.1998.tb00321.x. [DOI] [PubMed] [Google Scholar]
- Diederich P., Ertz D., Lawrey J.D., et al. Molecular data place the hyphomycetous lichenicolous genus Sclerococcum close to Dactylospora (Eurotiomycetes) and S. parmeliae in Cladophialophora (Chaetothyriales) Fungal Diversity. 2013;58:61–72. [Google Scholar]
- Ellis M.B. Clasterosporium and some allied dematiaceae-phragmosporae. II. Mycological Papers. 1959;72:1–75. [Google Scholar]
- Ellis M.B. Dematiaceous hyphomycetes IV. Mycological Papers. 1963;87:1–42. [Google Scholar]
- Ellis M.B. Dematiaceous hyphomycetes VI. Mycological Papers. 1965;103:1–46. [Google Scholar]
- Ellis M.B. Commonwealth Mycological Institute; Kew, Surrey, England: 1971. Dematiaceous hyphomycetes. [Google Scholar]
- Ellis M.B. Commonwealth Mycological Institute; Kew, Surrey, England: 1976. More dematiaceous hyphomycetes. [Google Scholar]
- Eslyn W.E., Highley T.L. Decay resistance and susceptibility of sapwood of fifteen tree species. Phytopathology. 1976;66:101–117. [Google Scholar]
- Eslyn W.E., Kirk T.H., Effland M.J. Changes in the chemical composition of wood caused by six soft rot fungi. Phytopathology. 1975;66:473–476. [Google Scholar]
- Fallah P.M., Crane J.L., Shearer C.A. Freshwater ascomycetes: two new species of Ascotaiwania from North America. Canadian Journal of Botany. 1999;77:87–92. [Google Scholar]
- Fehrer J., Réblová M., Bambasová V., et al. The root-symbiotic Rhizoscyphus ericae aggregate and Hyaloscypha (Leotiomycetes) are congeneric: Phylogenetic and experimental evidence. Studies in Mycology. 2019;92:195–225. doi: 10.1016/j.simyco.2018.10.004. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Fernández F.A., Lutzoni F.M., Huhndorf S.M. Teleomorph-anamorph connections: the new pyrenomycetous genus Carpoligna and its Pleurothecium anamorph. Mycologia. 1999;91:251–262. [Google Scholar]
- Figueroa R., Bran M.C., Morales, et al. Nuevos registros de hongos anamórficos para Guatemala. Revista Científica de la Facultad de Ciencias Químicas y Farmacia. 2016;26:40–50. [Google Scholar]
- Funk A., Shoemaker R.A. Stuartella suttonii n. sp., the teleomorph of Bactrodesmium obliquum var. suttonii. Canadian Journal of Botany. 1983;61:2277–2279. [Google Scholar]
- Gargas A., Taylor J.W. Polymerase chain reaction (PCR) primers for amplifying and sequencing nuclear SSU rDNA from lichenized fungi. Mycologia. 1992;84:589–592. [Google Scholar]
- Geiser D.M., Gueidan C., Miadlikowska J., et al. Eurotiomycetes: Eurotiomycetidae and Chaetothyriomycetidae. Mycologia. 2006–2007;98:1053–1064. doi: 10.3852/mycologia.98.6.1053. [DOI] [PubMed] [Google Scholar]
- Gooding G.V., Lucas G.B. Factors influencing sporangial formation and zoospore activity in Phytophthora parasitica var. nicotianae. Phytopathologia. 1959;49:277–281. [Google Scholar]
- Goos R.D. Listeromyces insignis refound. Mycologia. 1971;63:213–218. [Google Scholar]
- Grove W.B. New and noteworthy fungi: Part III. Journal of Botany. 1886;24:197–206. [Google Scholar]
- Guarro J., Gené J., Stchigel A.M., et al. CBS-KNAW Fungal Biodiversity Centre; Utrecht, The Netherlands: 2012. Atlas of soil ascomycetes. CBS Biodiversity series 10. [Google Scholar]
- Guarro J., Vieira L.A., Freitas D de, et al. Phaeoisaria clematidis as a cause of keratomycosis. Journal of Clinical Microbiology. 2000;38:2434–2437. doi: 10.1128/jcm.38.6.2434-2437.2000. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Gueidan C., Ruibal V.C., de Hoog G.S., et al. An extremotolerant rock-inhabiting ancestor for mutualistic and pathogen-rich fungal lineages. Studies in Mycology. 2008;61:111–119. doi: 10.3114/sim.2008.61.11. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Hall T.A. BioEdit 5.0.9: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symposium Series. 1999;41:95–98. [Google Scholar]
- Han J.-G., Hosoya T., Sung G.-H., et al. Phylogenetic reassessment of Hyaloscyphaceae sensu lato (Helotiales, Leotiomycetes) based on multigene analyses. Fungal Biology. 2014;118:150–167. doi: 10.1016/j.funbio.2013.11.004. [DOI] [PubMed] [Google Scholar]
- Harkness H.W. New species of California fungi. Bulletin of the California Academy of Sciences. 1884;1:29–47. [Google Scholar]
- Heim R., Buchli H., Duche J., et al. Memoire sur I'Antennopsis ectoparasite du termite de Saintonge. Bulletin trimestriel de la Société mycologique de France. 1951;67:336–364. [Google Scholar]
- Heredia G., Arias-Mota R.M., Mena-Portales J., et al. Saprophytic synnematous microfungi. New records and known species for Mexico. Revista Mexicana de Biodiversidad. 2018;89:604–618. [Google Scholar]
- Hernández-Restrepo M., Gené J., Castañeda-Ruiz R.F., et al. Emendation of the genus Bactrodesmiastrum (Sordariomycetes) and description of Bactrodesmiastrum monilioides sp. nov. from plant debris in Spain. Mycological Progress. 2015;14:1–7. [Google Scholar]
- Hernández-Restrepo M., Gené J., Castañeda-Ruiz R.F., et al. Phylogeny of saprobic microfungi from Southern Europe. Studies in Mycology. 2017;86:53–97. doi: 10.1016/j.simyco.2017.05.002. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Hernández-Restrepo M., Mena-Portales J., Gené J., et al. New Bactrodesmiastrum and Bactrodesmium from decaying wood in Spain. Mycologia. 2013;105:172–180. doi: 10.3852/12-004. [DOI] [PubMed] [Google Scholar]
- Hibbett D.S., Ohman A., Glotzer D., et al. Progress in molecular and morphological taxon discovery in Fungi and options for formal classification of environmental sequences. Fungal Biology Review. 2011;25:38–47. [Google Scholar]
- Hirooka Y., Rossman A.Y., Samuels G.J., et al. A monograph of Allantonectria, Nectria, and Pleonectria (Nectriaceae, Hypocreales, Ascomycota) and their pycnidial, sporodochial, and synnematous anamorphs. Studies in Mycology. 2012;71:1–210. doi: 10.3114/sim0001. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Höhnel FXR von. Mykologische Fragmente. Annales Mycologici. 1904;2:38–60. [Google Scholar]
- Höhnel FXR von. Fünfte vorläufige Mitteilung mykologische Ergebnisse (Nr. 300–500) Berichte der Deutschen Botanischen Gesellschaft. 1919;37:153–161. [Google Scholar]
- Holubová-Jechová V. Lignicolous Hyphomycetes from Czechoslovakia. 2. Bactrodesmium. Folia Geobotanica et Phytotaxonomica. 1972;7:407–418. [Google Scholar]
- Holubová-Jechová V. Bactrodesmiastrum, a new genus of lignicolous Hyphomycetes. Folia Geobotanica et Phytotaxonomica. 1984;19:103–106. [Google Scholar]
- Houbraken J., Samson R.A. Phylogeny of Penicillium and the segregation of Trichocomaceae into three families. Studies in Mycology. 2011;70:1–51. doi: 10.3114/sim.2011.70.01. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Hosoya T., Huhtinen S. Hyaloscyphaceae in Japan (7): Hyaloscypha albohyalina var. monodictys var. nov. Mycoscience. 2002;43:405–409. [Google Scholar]
- Huelsenbeck J.P., Ronquist F. MrBayes: Bayesian inference of phylogenetic trees. Bioinformatics. 2001;17:754–755. doi: 10.1093/bioinformatics/17.8.754. [DOI] [PubMed] [Google Scholar]
- Hughes S.J. Studies on Microfungi. III. Mastigosporium, Camposporium, and Ceratosporium. Mycological Papers. 1951;36:1–43. [Google Scholar]
- Hughes S.J. Trichocladium Harz. Transactions of the British Mycological Society. 1952;35:152–157. [Google Scholar]
- Hughes S.J. Conidiophores, conidia and classification. Canadian Journal of Botany. 1953;31:577–659. [Google Scholar]
- Hughes S.J. Revisiones Hyphomycetum aliquot cum appendice de nominibus rejiciendis. Canadian Journal of Botany. 1958;36:727–836. [Google Scholar]
- Hughes S.J. New Zealand Fungi. 25. Miscellaneous species. New Zealand Journal of Botany. 1978;16:311–370. [Google Scholar]
- Hughes S.J. Bactrodesmium biformatum. Fungi Canadenses. 1983;258:1–2. [Google Scholar]
- Hughes S.J. Bactrodesmium moenitum. Fungi Canadenses. 1984;261:1–2. [Google Scholar]
- Hughes K.W., Tulloss R.H., Petersen R.H. Intragenomic nuclear RNA variation in a cryptic Amanita taxon. Mycologia. 2018;110:93–103. doi: 10.1080/00275514.2018.1427402. [DOI] [PubMed] [Google Scholar]
- Hughes S.J., White G.P. Bactrodesmium obovatum. Fungi Canadenses. 1983;256:1–2. [Google Scholar]
- Hughes S.J., White G.P. Bactrodesmium obliquum var. suttonii. Fungi Canadenses. 1983;254:1–2. [Google Scholar]
- Hughes S.J., White G.P. Bactrodesmium spilomeum. Fungi Canadenses. 1983;257:1–2. [Google Scholar]
- Hughes S.J., White G.P. Bactrodesmium traversianum. Fungi Canadenses. 1983;259:1–2. [Google Scholar]
- Hughes S.J., White G.P. Bactrodesmium obliquum var. obliquum. Fungi Canadenses. 1983;253:1–2. [Google Scholar]
- Hughes S.J., White G.P. Bactrodesmium betulicola. Fungi Canadenses. 1983;251:1–2. [Google Scholar]
- Hughes S.J., White G.P. Bactrodesmium pithoideum. Fungi Canadenses. 1983;252:1–2. [Google Scholar]
- Hughes S.J., White G.P. Bactrodesmium cedricola. Fungi Canadenses. 1983;255:1–2. [Google Scholar]
- Hughes S.J., White G.P. Bactrodesmium rahmii. Fungi Canadenses. 1983;260:1–2. [Google Scholar]
- Hyde K.D., Chaiwan N., Norphanphoun C., et al. Mycosphere notes 169–224. Mycosphere. 2018;9:271–430. [Google Scholar]
- Hyde K.D., Norphanphoun C., Abreu V.P., et al. Fungal diversity notes 603–708: taxonomic and phylogenetic notes on genera and species. Fungal Diversity. 2017;87:1–235. [Google Scholar]
- Johnston P.R., Quijada L., Smith C.A., et al. A multigene phylogeny toward a new phylogenetic classification of Leotiomycetes. IMA Fungus. 2019;10:1. doi: 10.1186/s43008-019-0002-x. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Jones E.B.G., Eaton R.A. Savoryella lignicola gen. and sp. nov. from water-cooling towers. Transactions of the British Mycological Society. 1969;52:161–165. [Google Scholar]
- Katoh K., Standley D.M. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Molecular Biology and Evolution. 2013;30:772–780. doi: 10.1093/molbev/mst010. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Kauff F., Lutzoni F. Phylogeny of the Gyalectales and Ostropales (Ascomycota, Fungi): among and within order relationships based on nuclear ribosomal RNA small and large subunits. Molecular Phylogenetics and Evolution. 2002;25:138–156. doi: 10.1016/s1055-7903(02)00214-2. [DOI] [PubMed] [Google Scholar]
- Kirk P.M. New or interesting microfungi XIV. Dematiaceous hyphomycetes from Mt Kenya. Mycotaxon. 1985;23:305–352. [Google Scholar]
- Kirk P.M. New or interesting microfungi. XV. Miscellaneous hyphomycetes from the British Isles. Transactions of the British Mycological Society. 1986;86:409–428. [Google Scholar]
- Koukol O., Kolářová Z. Bactrodesmium gabretae (anamorphic Helotiales), a new sporodochial species described from spruce needles. Nova Hedwigia. 2010;91:243–248. [Google Scholar]
- Kusari S., Lamshoft M., Spiteller M. Aspergillus fumigatus Fresenius, an endophytic fungus from Juniperus communis L. Horstmann as a novel source of the anticancer pro-drug deoxypodophyllotoxin. Journal of Applied Microbiology. 2009;107:1019–1030. doi: 10.1111/j.1365-2672.2009.04285.x. [DOI] [PubMed] [Google Scholar]
- Landvik S. Neolecta, a fruit-body-producing genus of the basal ascomycetes, as shown by SSU and LSU DNA sequences. Mycological Research. 1996;100:199–202. [Google Scholar]
- Li D.W., Yang C.S., Jalsrai A. Bactrodesmiastrum domesticum sp. nov. and a noteworthy hyphomycete from indoor environments. Mycotaxon. 2017;132:779–787. [Google Scholar]
- Linder D.H. A monograph of the helicosporous Fungi Imperfecti. Annals of the Missouri Botanical Garden. 1929;16:227–348. [Google Scholar]
- Liu J.K., Hyde K.D., Jones E.B.G., et al. Fungal Diversity Notes 1–100: Taxonomic and phylogenetic contributions to fungal species. Fungal Diversity. 2015;72:1–197. [Google Scholar]
- Liu Y.J., Whelen S., Hall B.D. Phylogenetic relationships among ascomycetes: evidence from an RNA polymerase II subunit. Molecular Biology and Evolution. 1999;16:1799–1808. doi: 10.1093/oxfordjournals.molbev.a026092. [DOI] [PubMed] [Google Scholar]
- Luo Z.L., Hyde K.D., Bhat D.J., et al. Morphological and molecular taxonomy of novel species Pleurotheciaceae (Pleurotheciales) from freshwater habitats in Yunnan, China. Mycological Progress. 2018;17:511–530. [Google Scholar]
- Luo Z.L., Hyde K.D., Liu J.K., et al. Freshwater Sordariomycetes. Fungal Diversity. 2019;99:451–660. [Google Scholar]
- Malloch D. University of Toronto Press; Ontario, Canada: 1981. Moulds: their isolation, cultivation and identification. [Google Scholar]
- Markovskaja S. A new species of Bactrodesmium from Lithuania. Mycotaxon. 2006;97:337–343. [Google Scholar]
- Mason E.W., Hughes S.J. In: The natural history of the Scarborough district. Vol. 1. Geology and Botany. Walsh G.B., Rimington F.C., editors. Scarborough Field Naturalists Society; Scarborough, England: 1953. Bactrodesmium fasciculare; p. 159. [Google Scholar]
- Mason-Gamer R.J., Kellogg E.A. Testing for phylogenetic conflict among molecular data sets in the tribe Triticeae (Gramineae) Systematic Biology. 1996;45:524–545. [Google Scholar]
- Matsushima T. Kobe; Japan: 1971. Microfungi of the Solomon islands and Papua-New Guinea. [Google Scholar]
- Matsushima T. Kobe; Japan: 1975. Icones microfungorum a Matsushima lectorum. [Google Scholar]
- Matsushima T. Matsushima mycological memoirs 2. Matsushima Mycological Memoirs. 1981;2:1–68. [Google Scholar]
- Matsushima T. Matsushima mycological memoirs 7. Matsushima Mycological Memoirs. 1993;7:1–141. [Google Scholar]
- Matsushima K., Matsushima T. Fragmenta mycologica - I. Matsushima Mycological Memoirs. 1995;8:45–54. [Google Scholar]
- Mena-Portales J., Gené J., Guarro J. Contribución al estudio de los hifomicetos en España. XV. Boletín de la Sociedad Micológica de Madrid. 2000;25:73–82. [Google Scholar]
- Mena-Portales J., Mercado S.A. Algunos hifomecetes de las provincias Ciudad de La Habana y La Habana. Reporte de Investigacion del Instituto de Ecología y Sistemática. 1987;17:1–7. [Google Scholar]
- Mercado S.A., Heredia G., Mena-Portales J. New species of dematiaceous hyphomycetes from Veracruz, Mexico. Mycotaxon. 1995;55:491–499. [Google Scholar]
- Miller M.A., Pfeiffer W., Schwartz T. Proceedings of the Gateway Computing Environments Workshop (GCE), 14 Nov. 2010, New Orleans, LA. 2010. Creating the CIPRES Science Gateway for inference of large phylogenetic trees; pp. 1–8. [Google Scholar]
- Moreau C., Moreau M. Micromycètes africains. V. Revue de Mycologie. 1957;22:1–5. [Google Scholar]
- Mouzouras R., Jones E.B.G. Monodictys pelagica, the anamorph of Nereiospora cristata (Halosphaeriaceae) Canadian Journal of Botany. 1985;63:2444–2447. [Google Scholar]
- Nag Raj T.R. Waterloo, Mycologue Publications; Ontario, Canada: 1993. Coelomycetous anamorphs with Appendage-Bearing Conidia. [Google Scholar]
- Nawawi A., Kuthubutheen A.J. Canalisporium, a new genus of lignicolous hyphomycetes from Malaysia. Mycotaxon. 1989;34:475–487. [Google Scholar]
- Nierman W.C., Pain A., Anderson M.J., et al. Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus. Nature. 2005;438:1151–1156. doi: 10.1038/nature04332. [DOI] [PubMed] [Google Scholar]
- Nylander J. Evolutionary Biology Centre; Uppsala, Sweden: 2008. MrModeltest2 v. 2.3 (Program for selecting DNA substitution models using PAUP∗) [Google Scholar]
- O’Donnell K., Cigelnik E. Two divergent intragenomic rDNA ITS2 types within a monophyletic lineage of the fungus Fusarium are nonorthologous. Molecular Phylogenetics and Evolution. 1997;7:103–116. doi: 10.1006/mpev.1996.0376. [DOI] [PubMed] [Google Scholar]
- Okada G., Tubaki K. Conidiomatal structures of the stilbellaceous and allied fungi. Sydowia. 1986–1987;39:148–159. [Google Scholar]
- Olariaga I., Teres J., Martin J., et al. Pseudosclerococcum golindoi gen. et sp. nov., a new taxon with apothecial ascomata and a Chalara-like anamorph within the Sclerococcales (Eurotiomycetes) Mycological Progress. 2019;18:895–905. [Google Scholar]
- Oudemans C.A.J.A. Contributions á la flore mycologique des Pays-Bas. XVII. Nederlandsch Kruidkundig Archief, Ser. 3. 1901;2:170–351. [Google Scholar]
- Palm M.E., Stewart E.L. Two new combinations in Bactrodesmium. Mycotaxon. 1982;15:319–325. [Google Scholar]
- Pang K.L., Guo S.Y., Alas S.A., et al. A new species of marine Dactylospora and its phylogenetic affinities within the Eurotiomycetes, Ascomycota. Botanica Marina. 2014;57:315–321. [Google Scholar]
- Patil N.N. Aquatic hyphomycetes of Mahabaleshwar. Geobiosis New Reports. 1998;17:90. [Google Scholar]
- Penzig A.J.O., Saccardo P.A. Diagnoses fungorum novorum in insula Java collectorum. Ser. III. Malpighia. 1901–1902;15:201–260. [Google Scholar]
- Peyronel B. Primo Elenco di Funghi di val San Martino o valle della Germanasca. Memorie della Reale Accademia delle Scienze di Torino, Ser. 2. 1916;66:1–58. [Google Scholar]
- Pfister D.H. Castor, pollux and life histories of fungi. Mycologia. 1997;89:1–23. [Google Scholar]
- Pino-Bodas R., Zhurbenko M.P., Stenroos S. Phylogenetic placement within Lecanoromycetes of lichenicolous fungi associated with Cladonia and some other genera. Persoonia. 2017;39:91–117. doi: 10.3767/persoonia.2017.39.05. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Prasanna Kumar C. DNA barcodes for marine fungal identification and discovery. Fungal Ecology. 2013;6:408–418. [Google Scholar]
- Prasher I.B., Verma R.K. The genus Monodictys from Himachal Pradesh. Kavaka. 2016;47:138–142. [Google Scholar]
- Rabenhorst G.L. Fungi Europaei exsiccati, Klotzschii herbarii vivi mycologici continuatio. Editio nov. Series secunda. Cent. 1868;12:1101–1200. [Google Scholar]
- Raja H.A., Miller A.N., Shearer C.A. Freshwater ascomycetes: Aquapoterium pinicola, a new genus and species of Helotiales (Leotiomycetes) from Florida. Mycologia. 2008;100:141–148. doi: 10.3852/mycologia.100.1.141. [DOI] [PubMed] [Google Scholar]
- Rambaut A. 2009. FigTree v. 1.3.1.http://tree.bio.ed.ac.uk/software/ Computer program and documentation distributed by the author at. [Google Scholar]
- Ranghoo V.M., Hyde K.D. Ascolacicola aquatica gen. et sp. nov. and a new species of Ascotaiwania from wood submerged in a reservoir in Hong Kong. Mycologia. 1998;90:1055–1062. [Google Scholar]
- Ranghoo V.M., Hyde K.D., Liew E.C.Y. Family placement of Ascotaiwania and Ascolacicola based on DNA sequences from the large subunit rRNA gene. Fungal Diversity. 1999;2:159–168. [Google Scholar]
- Rao P.R. Two new species of Bactrodesmium from India. Indian Journal of Mycology and Plant Pathology. 1983;13:207–208. [Google Scholar]
- Rao V., de Hoog G.S. New or critical hyphomycetes from India. Studies in Mycology. 1986;28:1–84. [Google Scholar]
- Réblová M., Seifert K.A. Conioscyphascus, a new ascomycetous genus for holomorphs with Conioscypha anamorphs. Studies in Mycology. 2004;50:95–108. [Google Scholar]
- Réblová M., Seifert K.A. Discovery of the teleomorph of the hyphomycete, Sterigmatobotrys macrocarpa, and epitypification of the genus to holomorphic status. Studies in Mycology. 2011;68:193–202. doi: 10.3114/sim.2011.68.08. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Réblová M., Seifert K.A., Fournier J., et al. Phylogenetic classification of Pleurothecium and Pleurotheciella gen. nov. and its dactylaria-like anamorph (Sordariomycetes) based on nuclear ribosomal and protein-coding genes. Mycologia. 2012;104:1299–1314. doi: 10.3852/12-035. [DOI] [PubMed] [Google Scholar]
- Réblová M., Seifert K.A., Fournier J., et al. Newly recognised lineages of perithecial ascomycetes: the new orders Conioscyphales and Pleurotheciales. Persoonia. 2016;37:57–81. doi: 10.3767/003158516X689819. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Réblová M., Untereiner W.A., Štěpánek V., et al. Disentangling Phialophora section Catenulatae: disposition of taxa with pigmented conidiophores and recognition of a new subclass, Sclerococcomycetidae (Eurotiomycetes) Mycological Progress. 2016;16:27–46. [Google Scholar]
- Rehner S., Buckley E. A Beauveria phylogeny inferred from nuclear ITS and EF1-alpha sequences: evidence for cryptic diversification and links to Cordyceps teleomorphs. Mycologia. 2005;97:84–98. doi: 10.3852/mycologia.97.1.84. [DOI] [PubMed] [Google Scholar]
- Révay A. Some new or interesting hyphomycetes from Hungary. Nova Hedwigia. 1993;56:473–482. [Google Scholar]
- Rivera K.G., Seifert K.A. A taxonomic and phylogenetic revision of the Penicillium sclerotiorum complex. Studies in Mycology. 2011;70:139–158. doi: 10.3114/sim.2011.70.03. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Robert V., Szoke S., Eberhardt U., et al. The quest for a general and reliable fungal DNA barcode. The Open and Applied Informatics Journal. 2011;5:45–61. [Google Scholar]
- Saccardo P.A. Patavii; Italy: 1881. Fungi Italici Autographice Delineati (additis nonnullis extra-Italicis, asterisco notatis). Fascs 17–28. Tabs 641–1120. [Google Scholar]
- Saccardo P.A. Fungi Veneti novi vel critici V. Mycologiae Venetae addendi. Series XII. Michelia. 1881;2:241–301. [Google Scholar]
- Saccardo P.A. Sylloge Hyphomycetum. Sylloge Fungorum. 1886;4:1–807. [Google Scholar]
- Samuels G.J. Ascomycetes of New Zealand 1. Ohleria brasiliensis new record and its Monodictys anamorph with notes on taxonomy and systematics of Ohleria and Monodictys. New Zealand Journal of Botany. 1980;18:515–523. [Google Scholar]
- Samuels G.J., Rossman A.Y., Müller E. Life-history studies of Brazilian Ascomycetes. 6. Three species of Tubeufia with, respectively, dictyosporous/pycnidial and helicosporous anamorphs. Sydowia. 1978;31:180–192. [Google Scholar]
- Santa Izabel T.D.S., Gusmão L.F.P. Fungal succession on plant debris in three humid forests enclaves in the Caatinga biome of Brazil. Brazilian Journal of Botany. 2016;39:1065–1076. [Google Scholar]
- Sayers E.W., Cavanaugh M., Clark K., et al. GenBank. Nucleic Acids Research. 2019;47:D94–D99. doi: 10.1093/nar/gky989. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Schoch C.L., Seifert K.A., Huhndorf S., et al. Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for fungi. Proceedings of the National Academy of Sciences. 2012;109:6241–6246. doi: 10.1073/pnas.1117018109. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Schoch C., Sung G.H., López-Giráldez F., et al. The Ascomycota tree of life: a phylum-wide phylogeny clarifies the origin and evolution of fundamental reproductive and ecological traits. Systematic Biology. 2009;58:224–239. doi: 10.1093/sysbio/syp020. [DOI] [PubMed] [Google Scholar]
- Schweinitz von LD. Synopsis fungorum in America boreali media degentium. Transactions of the American Philosophical Society. 1832;4:141–316. [Google Scholar]
- Shearer C.A., Motta J.J. Ultrastructure and conidiogenesis in Conioscypha (Hyphomycetes) Canadian Journal of Botany. 1973;51:1747–1751. [Google Scholar]
- Sivanesan A., Chang H.S. Ascotaiwania, a new amphisphaeriaceous ascomycete genus on wood from Taiwan. Mycological Research. 1992;96:481–484. [Google Scholar]
- Sivichai S., Hywel-Jones N., Jones E.B.G. Lignicolous freshwater Ascomycota from Thailand: 1. Ascotaiwania sawadae and its anamorph state Monotosporella. Mycoscience. 1998;39:307–311. [Google Scholar]
- Spatafora J.W., Sung G.H., Sung J.M., et al. Phylogenetic evidence for an animal pathogen origin of ergot and the grass endophytes. Molecular Ecology. 2007;16:1701–1711. doi: 10.1111/j.1365-294X.2007.03225.x. [DOI] [PubMed] [Google Scholar]
- Stadler M., Lambert C., Wibberg D., et al. Intragenomic polymorphisms in the ITS region of high quality genomes of the Hypoxylaceae (Xylariales, Ascomycota) Mycological Progress. 2020;19:235–245. [Google Scholar]
- Stamatakis A. RAxML Version 8: A tool for Phylogenetic Analysis and Post-Analysis of Large Phylogenies. Bioinformatics. 2014;30:1312–1313. doi: 10.1093/bioinformatics/btu033. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Stielow J.B., Lévesque C.A., Seifert K.A., et al. One fungus, which genes? Development and assessment of universal primers for potential secondary fungal DNA barcodes. Persoonia. 2015;35:242–263. doi: 10.3767/003158515X689135. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Su H.Y., Udayanga D., Luo Z.L., et al. Hyphomycetes from aquatic habitats in Southern China: Species of Curvularia (Pleosporaceae) and Phragmocephala (Melanommataceae) Phytotaxa. 2015;226:201–216. [Google Scholar]
- Subramanian C.V. A reassessment of Sporidesmium(Hyphomycetes) and some related taxa. Proceedings of the Indian Academy of Sciences (Plant Sciences) 1992;58:179–190. [Google Scholar]
- Sutton B.C. A new species of Bactrodesmium from white spruce. Canadian Journal of Botany. 1967;45:1777–1781. [Google Scholar]
- Sutton B.C. Hyphomycetes from Manitoba and Saskatchewan, Canada. Mycological Papers. 1973;132:1–143. [Google Scholar]
- Sutton B.C. Coelomycetes V. Coryneum. Mycological Papers. 1975;138:1–224. [Google Scholar]
- Sutton B.C. Some dematiaceous Hyphomycetes from Eucalyptus leaf litter. Boletín de la Sociedad Argentina de Botánica. 1977;18:154–161. [Google Scholar]
- Sutton B.C. Commonwealth Mycological Institute; Kew, Surrey, England: 1980. The coelomycetes, fungi imperfecti with pycnidia, acervuli and stromata. [Google Scholar]
- Sutton B.C., Cole G.T. Thozetella(Hyphomycetes): an exercise in diversity. Transactions of the British Mycological Society. 1983;81:97–107. [Google Scholar]
- Sydow P., Sydow H. Weitere neue Micromyceten der Philippinen-Inseln. Annales Mycologici. 1920;18:98–104. [Google Scholar]
- Tanaka K., Hirayama K., Yonezawa H., et al. Revision of the Massarineae (Pleosporales, Dothideomycetes) Studies in Mycology. 2015;82:75–136. doi: 10.1016/j.simyco.2015.10.002. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Tubaki K. Studies on the Japanese Hyphomycetes. V. Leaf and stem group with a discussion of the classification of Hyphomycetes and their perfect stages. Journal of Hattori Botanical Laboratory. 1958;20:142–244. [Google Scholar]
- Tubaki K. Notes on the Japanese Hyphomycetes VII. Cancellidium, a new hyphomycetes genus. Transactions of the Mycological Society of Japan. 1975;21:357–360. [Google Scholar]
- Udaiyan K. Some interesting hyphomycetes from the industrial water cooling towers of Madras. Journal of Economic and Taxonomic Botany. 1991;15:627–647. [Google Scholar]
- Udaiyan K., Manian S. Fungi colonizing wood in the cooling tower water system at the Madras fertilizer company, Madras, India. International Biodeterioration Bulletin. 1991;27:351–371. [Google Scholar]
- Untereiner W.A., Yue Q., Chen L., et al. Phialophora section Catenulatae disassembled: New genera, species, and combinations and a new family encompassing taxa with cleistothecial ascomata and phialidic asexual states. Mycologia. 2019;111:998–1027. doi: 10.1080/00275514.2019.1663106. [DOI] [PubMed] [Google Scholar]
- Vargas-Asensio G., Pinto-Tomas A., Rivera B., et al. Uncovering the cultivable microbial diversity of Costa Rican beetles and its ability to break down plant cell wall components. PLoS One. 2014;9(11) doi: 10.1371/journal.pone.0113303. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Vijaykrishna D., Hyde K.D. Inter-and intra-stream variation of lignicolous freshwater fungi in tropical Australia. Fungal Diversity. 2006;21:203–224. [Google Scholar]
- Vilgalys R., Hester M. Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. Journal of Bacteriology. 1990;172:4238–4246. doi: 10.1128/jb.172.8.4238-4246.1990. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Vu D., Groenewald M., de Vries M., et al. Large-scale generation and analysis of filamentous fungal DNA barcodes boosts coverage for kingdom fungi and reveals thresholds for fungal species and higher taxon delimitation. Studies in Mycology. 2019;92:135–154. doi: 10.1016/j.simyco.2018.05.001. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Wang X.W., Yang F.Y., Meijer M., et al. Redefining Humicolasensu stricto and related genera in the Chaetomiaceae. Studies in Mycology. 2019;93:65–153. doi: 10.1016/j.simyco.2018.07.001. [DOI] [PMC free article] [PubMed] [Google Scholar]
- White T.J., Bruns T., Lee S., et al. In: PCR protocols: a guide to methods and applications. Innis M.A., Gelfand D.H., Sninsky J.J., White T.J., editors. Academic Press; San Diego, California: 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics; pp. 315–322. [Google Scholar]
- Wiltshire S.P. The original and modern conceptions of Stemphylium. Transactions of the British Mycological Society. 1938;21:211–239. [Google Scholar]
- Wong M.K., Hyde K.D. Diversity of fungi on six species of Gramineae and one species of Cyperaceae in Hong Kong. Mycological Research. 2001;105:1485–1491. [Google Scholar]
- Yang J., Maharachchikumbura S.S.N., Bhat D.J., et al. Fuscosporellales, a new order of aquatic and terrestrial Hypocreomycetidae (Sordariomycetes) Cryptogamie, Mycologie. 2016;37:449–475. [Google Scholar]
- Yu X., Dong W., Bhat D.J., et al. Cylindroconidiis aquaticus gen. et sp. nov., a new lineage of aquatic hyphomycetes in Sclerococcaceae (Eurotiomycetes) Phytotaxa. 2018;372:79–87. [Google Scholar]
- Zhang S.-N., Abdel-Wahab M.A., Jones E.B.G., et al. Additions to the genus Savoryella (Savoryellaceae), with the asexual morphs Savoryella nypae comb. nov. and S. sarushimana sp. nov. Phytotaxa. 2019;408:195–207. [Google Scholar]
- Zhang N., Castlebury L.A., Miller A.N., et al. An overview of the systematics of the Sordariomycetes based on a four-gene phylogeny. Mycologia. 2006–2007;98:1076–1108. doi: 10.3852/mycologia.98.6.1076. [DOI] [PubMed] [Google Scholar]
- Zhang N., Luo J., Rossman A.Y., et al. Generic names in Magnaporthales. IMA Fungus. 2016;7:155–159. doi: 10.5598/imafungus.2016.07.01.09. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Zhang Z., Schwartz S., Wagner L., et al. A greedy algorithm for aligning DNA sequences. Journal of Computational Biology. 2000;7:203–214. doi: 10.1089/10665270050081478. [DOI] [PubMed] [Google Scholar]
- Zucconi L., Lunghini D. Studies on Mediterranean hyphomycetes. VI. Remarks on Bactrodesmium, and B. cubense comb. nov. Mycotaxon. 1997;63:323–328. [Google Scholar]