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. 2020 Aug 7;11:1701. doi: 10.3389/fmicb.2020.01701

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Copyright © 2020 Bannantine, Conde, Bayles, Branger and Biet.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Number of single nucleotide polymorphisms among all 28 M. avium subspecies genomes using Map K-10 as the reference genome. Shown are the total number of SNPs detected in each strain (A) with the slate bars representing Map, beige bars representing Mah and light blue bars representing Maa strains. (B) The number of synonymous (blue bars, first value) and non-synonymous (red bars, second value) SNPs. Both graphs were plotted on a log scale with the strain designation listed in the center. Numerical differences between total SNPs and the combined nonsynonymous plus synonymous SNPs represent the intergenic SNPs.