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. 2020 Aug 15;10:143. doi: 10.1186/s13568-020-01077-5

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© The Author(s) 2020

Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 1 — Comparison of feed microbiota with ileum, cecum and excreta microbiota. The Fig. presents 3D PCoA plot based on unweighted UniFrac distance (a); core microbiota at a genus level (b); LEfSe analysis of the top 50 genera (c) and Chao 1 microbial richness estimator (d). In all plots feed samples are represented in grey, cecum in red, ileum yellow and excreta in blue