1 |
Viral RNA-dependent RNA polymerase (RdRp) and Spike glycoprotein (SGp) |
Viral component that attaches to host cell |
Limonin, Quercetin and Kaempferol |
Inhibitory potential with high binding energy to viral components from -9 to -7.1 kcal/mol (in silico) [15] |
2 |
3a Channel Protein |
Viral component that attaches to host cell |
Kaempferol |
Blocks the 3a channel that is encoded by ORF 3a of SARS-CoV (in vitro) [238] |
3 |
ACE2 |
Main receptor for viral entry |
Myricetin, Caffeic Acid Phenethyl Ester, Hesperetin and Pinocembrin |
Inhibitory potential with high binding energy to ACE2 (-8.97 kcal/mol) (in silico) [26] |
Kaempferol |
Inhibitory potential with high binding energy to ACE2 (-7.5 kcal/mol) (in silico) [239] |
Quercetin |
Inhibitory potential with high binding energy to ACE2 (-10.4 kcal/mol) (in silico) [25] |
3 |
TMPRSS2 |
Serine protease that mediates spike protein priming for viral entry |
Kaempferol |
Downregulates androgen receptors such as PSA and TMPRSS2 in a prostate cancer model (in vitro) [83] |
4 |
PAK-1 |
PAK-1 (RAC/CDC42-activated kinases) - Responsible for suppression of immune system in hosts |
Caffeic Acid and Caffeic Acid Phenethyl Ester |
Downregulates PAK-1 associated with Rac1 activation (in vitro) [18] |
Inhibits PAK-1 directly or up-stream, blocking coronaviral infection (Review) [10] |
5 |
3C-like protease |
Mediates the proteolytic processing of replicase polypeptides 1a and 1ab into functional proteins in SARS-CoV-2 infection |
Hesperetin |
Inhibits cleavage activity of 3CLpro (in vitro) [240] |
6 |
Inflammatory response |
Response to viral infection that leads to organ injury |
Propolis Extract |
Inhibits NF-kB activation (in vitro) [241] |
Induces Ca2+ signaling in dendritic cells in Peyer’s patches, improving the immune response (in vitro) [242] |
Attenuates the inflammatory response through intracellular ROS and NO levels with downregulation of IL‐1β and IL‐6 expression (in vitro) [27] |
Regulates IFN-γ, IL-6, and IL-10 cytokines in an experimental asthma model (in vivo) [243] |
Increases TGF-β and IL-10 levels, which contribute to the regulation of the inflammatory process in Acute Pulmonary Inflammation (in vivo) [24] |
Inhibits the production of ROS, RNS, NO, cytokines IL-1α, IL-1β, IL-4, IL-6, IL-12p40, IL-13, TNF-α, G-CSF, GM-CSF, MCP-1, MIP-1α, MIP-1β, and RANTES in stimulated J774A.1 macrophages (in vitro) [244] |
Kaempferol |
Reduces TNF-α, IL-6, VEGF via the ERK-NFkB-cMyc-p21 pathway (in vitro) [83] |
Caffeic Acid Phenethyl Ester |
Inhibits NF-kB activation in HTLV-1 infection (in vitro) [245] |
Modulates JAK/STAT signaling and attenuates oxidative stress and inflammation [87]. |
|
Immunomodulation |
Adaptive immune response against viral infection |
Propolis Extract |
Increases humoral and cellular response in mice immunized with Suid herpesvirus type 1[106] |
Suppresses the differentiation of Th17 cells by inhibition of IL-6-induced phosphorylation of signal transducer and activator of transcription 3 (STAT3) (in vivo) [88] |
7 |
Thrombosis |
Blood clotting dysregulation caused by viral infection |
Quercetin |
Inhibits thrombin in thrombotic manifestations (in vitro) [246] |
8 |
Viral replication |
Viral translation |
Kaempferol and Hesperetin |
Inhibits internal ribosomal entry site (IRES) activity required for viral protein translation (in vitro) [247] |
Transcription |
Kaempferol |
Inhibits human immunodeficiency virus reverse transcriptase-associated DNA polymerase as well as RNAase H and RNase H activities (in vitro) [248] |
Presents potent anti-HIV-1 reverse transcriptase activity (in vitro) [249] |
Endocytosis |
Quercetin |
Decreases Akt phosphorylation and viral endocytosis of Rhinovirus (in vivo) [250] |
Replication and virion integrity |
Prevents up-regulation of diacylglycerol acyltransferase (DGAT) required for hepatitis C virus replication (in vitro) [251] |
Replication |
Decreases heat shock proteins and Hepatitis B virus transcription levels (in vitro) [252] |
Endocytosis |
Caffeic Acid |
Inhibits Hepatitis B virus-DNA replication (in vivo & in vitro) [253] |
Endocytosis |
Inhibits influenza A virus (IAV) replication (in vitro) [254] |
Endocytosis |
Inhibits influenza A virus (IAV) activity through neuraminidases (in vitro) [255] |
Transcription |
Caffeic Acid Phenethyl Ester |
Inhibits HIV-1 integrase (Review) [256] |