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. 2020 Jul 27;9:e55502. doi: 10.7554/eLife.55502

Table 2. Accuracy of prediction of F-actin in mouse kidney tissue as a function of input channels.

Median values of the Pearson correlation (r) and structural similarity index (SSIM) between predicted and target volumes of F-actin. We evaluated combinations of brightfield (BF), phase (Φ), retardance (ρ), orientation x (ωx), and orientation y (ωy), as input. Model training conditions and computation of test metrics is described in Table 1.

Translation model Input(s) rxy rxz rxyz SSIMxy SSIMxz SSIMxyz
Stack→Slice (2.5D, z=5) ρ 0.86 0.84 0.87 0.81 0.76 0.82
BF 0.86 0.84 0.86 0.82 0.77 0.83
Φ 0.87 0.85 0.88 0.83 0.78 0.84
Φ, ρ, ωx, ωy 0.88 0.87 0.89 0.83 0.80 0.85
BF, ρ, ωx, ωy 0.88 0.87 0.89 0.83 0.79 0.85