Table 2. Accuracy of prediction of F-actin in mouse kidney tissue as a function of input channels.
Median values of the Pearson correlation (r) and structural similarity index (SSIM) between predicted and target volumes of F-actin. We evaluated combinations of brightfield (BF), phase (Φ), retardance (ρ), orientation x (ωx), and orientation y (ωy), as input. Model training conditions and computation of test metrics is described in Table 1.
Translation model | Input(s) | rxy | rxz | rxyz | SSIMxy | SSIMxz | SSIMxyz |
---|---|---|---|---|---|---|---|
Stack→Slice (2.5D, ) | ρ | 0.86 | 0.84 | 0.87 | 0.81 | 0.76 | 0.82 |
BF | 0.86 | 0.84 | 0.86 | 0.82 | 0.77 | 0.83 | |
Φ | 0.87 | 0.85 | 0.88 | 0.83 | 0.78 | 0.84 | |
Φ, ρ, ωx, ωy | 0.88 | 0.87 | 0.89 | 0.83 | 0.80 | 0.85 | |
BF, ρ, ωx, ωy | 0.88 | 0.87 | 0.89 | 0.83 | 0.79 | 0.85 |