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. 2020 Aug 17;11:4126. doi: 10.1038/s41467-020-17980-1

Fig. 1. Population structure and susceptibility profile of N. gonorrhoeae global meta-analysis collection.

Fig. 1

A midpoint rooted recombination-corrected maximum likelihood phylogeny of 4852 genomes based on 68697 SNPs (Supplementary Table 1) was annotated with binarized resistance (ciprofloxacin) or decreased susceptibility (azithromycin, ceftriaxone) values. Annotation rings are listed in order of ciprofloxacin, ceftriaxone, and azithromycin from innermost to outermost. For ciprofloxacin, MIC < 1 μg/ml is light purple, and MIC ≥ 1 μg/ml is dark purple. For ceftriaxone, MIC < 0.125 μg/ml is light blue, and MIC ≥ 0.125 μg/ml is dark blue. For azithromycin, MIC ≤ 1 μg/ml is light pink, and MIC > 1 μg/ml is dark pink. Branch length represents total number of substitutions after removal of predicted recombination.