TABLE 5.
Secondary structure components and mid-point denaturation temperatures (Tm) of TrwBR388, TMDTraJCDTrwB, TrwBΔN50, TrwBΔN70, MobBCloDF13, and MobBΔTMD.
TrwBR388a |
TMDTraJCDTrwB |
TrwBΔN50a |
TrwBΔN70a |
MobBCloDF13 |
MobBΔTMD |
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Assignment | Position (cm–1) | Area (%) | Position (cm–1) | Area (%) | Position (cm–1) | Area (%) | Position (cm–1) | Area (%) | Position (cm–1) | Area (%) | Position (cm–1) | Area (%) |
β-T + β-S | 1676 | 5 | 1671 | 14 | 1676 | 2 | 1675 | 8 | 1677 | 7 | 1682 | 3 |
β-T | 1661 | 27 | / | / | 1665 | 11 | 1665 | 11 | 1666 | 13 | 1665 | 22 |
α-H | 1647 | 41 | 1654 | 35 | 1654 | 27 | 1653 | 26 | 1653 | 35 | 1652 | 29 |
Unordered + β-S | / | / | 1640 | 30 | 1641 | 37 | 1640 | 39 | 1639 | 29 | 1639 | 30 |
β-S | 1631 | 27 | 1626 | 17 | 1628 | 17 | 1627 | 12 | / | / | / | / |
Tm (°C) | 48 | 51 | 48 | 63b | 56 | 62 |
Secondary structure components were obtained from band decomposition of the amide I band of IR spectra in D2O medium. The spectra are shown in Figure 2. Only areas above 5% are shown. For details on assignments, see the text. aData from Vecino et al. (2011, 2012). bUnpublished data from our group. β-T, β-turns; β-S, β-sheet; α-H, α-helix; Tm, mid-point denaturation temperature.