TABLE 2.
Parameter | Value for:a
|
||
---|---|---|---|
RLA-A1/VP 60-1 | RLA-A1/VP 60-2 | RLA-A1/VP 60-10 | |
PDB accession no. | 6M2J | 6M24 | 6M2K |
Data processing | |||
Space group | P212121 | P212121 | P212121 |
Cell dimensions | |||
a, b, c (Å) | 49.63, 74.36, 155.67 | 49.58, 76.22, 155.08 | 49.61, 74.30, 152.19 |
α, β, γ (˚) | 90.00, 90.00, 90.00 | 90.00, 90.00, 90.00 | 90.00, 90.00, 90.00 |
Wavelength (Å) | 0.97911 | 1.03853 | 1.03923 |
Resolution (Å) | 50.0–2.2 (2.28-2.2) | 50.0–2.3 (2.38–2.3) | 50.0–2.6 (2.69–2.6) |
Total no. of reflections | 276,797 | 346,034 | 214,930 |
No. of unique reflections | 29,903 | 27,014 | 18,060 |
Completeness (%) | 99.7 (98.8) | 99.9 (100.0) | 99.9 (100.0) |
Redundancy | 7.3 (9.3) | 12.2 (12.8) | 11.9 (12.2) |
Rmerge (%)b | 17.4 (95.5) | 10.1 (85.7) | 11.2 (75.8) |
I/σ | 2.41 | 2.75 | 2.78 |
Refinement | |||
Rwork (%)c | 20.2 | 19.4 | 21.5 |
Rfree (%) | 25.6 | 24.6 | 29.4 |
RMSD | |||
Bond length (Å) | 0.009 | 0.008 | 0.009 |
Bond angle (˚) | 1.250 | 1.200 | 1.270 |
Avg B factor (Å2) | 38.27 | 36.77 | 40.34 |
Ramachandran plot quality (%) | |||
Favored (%) | 97.88 | 97.88 | 95.23 |
Allowed (%) | 2.12 | 2.12 | 4.77 |
Outliers (%) | 0.00 | 0.00 | 0.00 |
Numbers in parentheses represent the highest-resolution shell.
, where Ii refers to the observed intensity and is the average intensity of multiple observations of symmetry related reflections.
, where Rfree is calculated for a randomly chosen 5% of reflections, and Rwork is calculated for the remaining 95% of reflections used for structure refinement.