TABLE 4.
ORFs with distant homology to PA-SR01 identified using HHpred analysis
| ORF | Pfam IDa | Strand | E value | Putative protein encoded |
|---|---|---|---|---|
| 3 | PF10544.9 | + | 5.2E−16 | T5orf172 domain |
| 24 | PF10123.9 | + | 4.5E−18 | Mu-like prophage I protein |
| 32 | PF03864.15 | + | 1.5E−30 | Phage major capsid protein E |
| 139 | PF11645.8 | − | 0.0000018 | PD-(D/E)XK endonuclease |
Pfam ID data can be found at https://pfam.xfam.org.