Table 2.
Number of genes regulated in the microarray data with FDR < 5% in each within and between group comparison
| No. regulated genes (FDR < 5%) | |
|---|---|
| VAT vs. SAT in group comparison | |
| CC VAT vs. SAT | 2101 |
| CWS VAT vs. SAT | 1722 |
| Control VAT vs. SAT | 1659 |
| VAT between group comparisons | |
| CC vs. control | 2200 |
| CWS vs. control | 1253 |
| CC vs. cWS | 0a |
| SAT between group comparisons | |
| CC vs. Control | 0b |
| CWS vs. Control | 0c |
| CC vs. CWS | 0d |
CC, cancer cachexia; CWS, cancer weight stable; FDR, false discovery rate; SAT, subcutaneous adipose tissue; VAT, visceral adipose tissue.
lowest adjusted P value = 0.7
lowest adjusted P value = 0.1
lowest adjusted P value = 1
lowest adjusted P value = 0.5.