| ABA | Abscisic acid |
| BBE | Berberine bridge enzyme |
| CKX | Cytokinin oxidases/dehydrogenase |
| EC number | Enzyme Commission number |
| EMB | EMBRYO-DEFECTIVE |
| ER | Endoplasmatic reticulum |
| FAD | Flavin adenine dinucleotide |
| FADHy | FAD hydrolases |
| FADS | FAD synthetase |
| FMN | Flavin mononucleotide |
| FMNHy | FMN hydrolases |
| FMO | Flavin-containing monooxygenase |
| FMOGS-OX | Flavin monooxygenase glucosinolate s-oxygenase enzymes |
| GO | Gene ontology |
| GSLs | Glucosinolates |
| GTP | Guanosine 5′-triphosphate |
| IAA | Indol-3-acetic acid |
| JA | Jasmonic acid |
| N/A | Not available |
| NADPH | Nicotinamide adenine dinucleotide phosphate |
| PDB | Protein Data Bank |
| RBOH | Respiratory burst oxidase homolog |
| RK | Riboflavin kinase |
| ROS | Reactive oxygen species |