Table 1.
Characterization of DE-circRNAs with fold change more than 3 in porcine granulosa cells between healthy and atretic antral follicles.
| Gene Name | FDR Value | Fold Change | Up/Down | Catalog | No of Exons | Length | Chromosome |
|---|---|---|---|---|---|---|---|
| circ_IL1R1 | 0.046 | 20.64 | up | sense overlapping | 50,710 | chr3 | |
| circ_KIF16B | 0.004 | 13.56 | up | exonic | 5 | 482 | chr17 |
| circ_UNKL | 0.024 | 10.60 | up | exonic | 4 | 565 | chr3 |
| circ_PSPC1 | 0.04 | 8.33 | up | exonic | 4 | 680 | chr11 |
| circ_WDR7 | 0.049 | 7.99 | up | exonic | 2 | 859 | chr1 |
| circ_NCOR1 | 0.045 | 6.63 | up | sense overlapping | 64,858 | chr12 | |
| circ_PTBP3 | 0.036 | 6.34 | up | exonic | 2 | 286 | chr1 |
| circ_MORC3 | 0.037 | 6.18 | up | exonic | 3 | 350 | chr13 |
| circ_GMPS | 0.029 | 5.87 | up | exonic | 4 | 499 | chr13 |
| circ_MATR3 | 0.045 | 5.76 | up | exonic | 6 | 972 | chr2 |
| circ_LSM14A | 0.045 | 3.72 | up | sense overlapping | 2856 | chr6 | |
| circ_MCC | 0.045 | 3.67 | up | sense overlapping | 67,640 | chr2 | |
| circ_ZMYM4 | 0.036 | 21.30 | down | exonic | 5 | 670 | chr6 |
| circ_FAM49B | 0.011 | 16.48 | down | exonic | 3 | 311 | chr4 |
| circ_ANGPT1 | 0.019 | 13.53 | down | exonic | 6 | 908 | chr4 |
| circ_MFSD14A | 0.004 | 13.33 | down | exonic | 2 | 243 | chr4 |
| circ_ZC3H6 | 0.012 | 13.15 | down | sense overlapping | 4764 | chr3 | |
| circ_SLC30A7 | 0.017 | 13.01 | down | exonic | 6 | 660 | chr4 |
| circ_CBFA2T2 | 0.007 | 12.63 | down | exonic | 4 | 768 | chr17 |
| circ_LOC100155760 | 0.012 | 12.02 | down | antisense | 17,825 | chr1 | |
| circ_POLDIP3 | 0.017 | 11.92 | down | sense overlapping | 1227 | chr5 | |
| circ_HCN1 | 0.012 | 11.78 | down | sense overlapping | 788 | chr16 | |
| circ_SMAD2 | 0.006 | 11.57 | down | sense overlapping | 4357 | chr1 | |
| circ_VPS50 | 0.045 | 11.03 | down | sense overlapping | 16,465 | chr9 | |
| circ_CSDE1 | 0.005 | 10.67 | down | exonic | 2 | 208 | chr4 |
| circ_ANKHD1 | 0.006 | 10.34 | down | exonic | 6 | 936 | chr2 |
| circ_RB1 | 0.003 | 9.82 | down | exonic | 8 | 793 | chr11 |
| circ_GOLGA4 | 0.002 | 9.58 | down | exonic | 6 | 471 | chr13 |
| circ_STIP1 | 0.007 | 9.30 | down | exonic | 3 | 351 | chr2 |
| circ_NDUFB2 | 0.003 | 8.72 | down | sense overlapping | 7158 | chr18 | |
| circ_EMC2 | 0.019 | 8.28 | down | exonic | 5 | 444 | chr4 |
| circ_ABHD17B | 0.04 | 8.05 | down | exonic | 2 | 650 | chr1 |
| circ_SNX6 | 0.011 | 7.80 | down | sense overlapping | 328 | chr7 | |
| circ_TMEM39A | 0.021 | 7.80 | down | exonic | 2 | 307 | chr13 |
| circ_CSPP1 | 0.023 | 7.73 | down | sense overlapping | 23,646 | chr4 | |
| circ_RNaseP_nuc | 0.043 | 7.57 | down | sense overlapping | 131 | chr7 | |
| circ_GCLC | 0.04 | 7.39 | down | exonic | 5 | 603 | chr7 |
| circ_EED | 0.041 | 7.34 | down | exonic | 4 | 367 | chr9 |
| circ_ PPP3CC | 0.036 | 7.10 | down | sense overlapping | 665 | chr14 | |
| circ_CPEB2 | 0.003 | 7.08 | down | antisense | 56,995 | chr8 | |
| circ_SLC25A37 | 0.033 | 5.62 | down | sense overlapping | 59,863 | chr14 | |
| circ_FAM188A | 0.045 | 5.41 | down | exonic | 8 | 707 | chr10 |
| circ_ENSSSCG13774 | 0.042 | 4.99 | down | sense overlapping | 42,224 | chr2 | |
| circ_N4BP2 | 0.04 | 4.91 | down | sense overlapping | 14,757 | chr8 | |
| circ_CDH2 | 0.045 | 4.56 | down | exonic | 11 | 1323 | chr6 |
| circ_PPP3CB | 0.04 | 4.14 | down | exonic | 8 | 1023 | chr14 |
| circ_ENSSSCG00025785 | 0.019 | 3.46 | down | sense overlapping | 33,804 | chr13 | |
| circ_ELL2 | 0.046 | 3.42 | down | exonic | 3 | 473 | chr2 |
| circ_MELK | 0.037 | 3.41 | down | exonic | 6 | 611 | chr1 |
| circ_POR | 0.04 | 3.41 | down | sense overlapping | 367 | GL894019-2 | |
| circ_ENSSSCG00021189 | 0.012 | 3.32 | down | sense overlapping | 81,337 | chr11 | |
| circ_NUP155 | 0.007 | 3.16 | down | exonic | 2 | 272 | chr16 |