| BCR | B cell receptor |
| BMP | Bone morphogenetic protein |
| DFG | Asparagine-phenylalanine-glycine |
| GM-CSF | Granulocyte-macrophage colony-stimulating factor |
| HH | Hedgehog |
| IC50 | Half maximal inhibitory concentration |
| IHH | Indian hedgehog |
| IL | Interleukin |
| IL1RN | Interleukin-1 antagonist (gene and cDNA) |
| IL-23R | Interleukin-23 receptor |
| JNK | c-Jun N-terminal kinase |
| LPS | Lipopolysaccharide |
| MAP3K7 | Mitogen-activated protein kinase kinase kinase 7 (also known as TAK1) |
| MAPK | Mitogen-activated protein kinase |
| M-CSF | Macrophage colony-stimulating factor |
| MMP | Matrix metalloprotease |
| MSCs | Mesenchymal stem cells |
| NF-κB | Nuclear factor kappa-light-chain-enhancer of activated B cells |
| NK | Natural killer cells |
| NSAID | Non-steroidal anti-inflammatory drugs |
| p38 | Protein with molecular weight 38 kDa |
| PI3K | Phosphatidylinositol 3-kinase |
| PTHrP | Parathyroid hormone-related protein |
| ROR-γt | Retinoic acid-related orphan receptor gamma T |
| RUNX-2 | Runt-related transcription factor-2 |
| SCX | Scleraxis |
| SOX9 | Sex-determining region Y-box 9 |
| TAB | TAK1 binding protein |
| TAK1 | TGF-β-activated kinase-1 |
| TCR | T cell receptor |
| TGF-β | Transforming growth factor-β |
| THP-1 | Tohoku hospital pediatrics-1 |
| TLR | Toll-like-receptor |
| TNF-α | Tumor necrosis factor-alpha |