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. 2020 Jul 21;91:1994. doi: 10.4102/jsava.v91i0.1994

TABLE 1.

Primers sequences, source of primers for amplification and polymerase chain reaction conditions used for in this study.

Target gene Sequence (5’–3’) Amplicon size (bp) Conditions References
invA GTGAAATTATCGCCACGTTCGGGCAA
TCATCGCACCGTCAAAGGAACC
280 94 °C for 5 min, 94 °C for 45 s, 58 °C for 45 s, 72 °C for 70 min, 72 °C for 7 min, 30 cycles Ekwanzala et al. 2017
SdfI TGTGTTTTATCTGATGCAAGAGG
TGAACTACGTTCGTTCTTCTGG
303 95 °C for 2 min, 95 °C for 1 min, 57 °C for 1 min, 72 °C for 2 min; 72 °C for 5 min, 30 cycles Mohd Afendy & Son 2015
Spy TTGTTCACTTTTTACCCCTGAA
CCCTGACAGCCGTTAGATATT
401 95 °C for 2 min, 95 °C for 30 s, 57 °C for 30 s, 72 °C for 30 s, 72 °C for 4 min, 30 cycles Alvarez et al. 2004
hilA CGGAACGTTATTTGCGCCATGCTGAGGTAG
GCATGGATCCCCGCCGGCGAGATTGTG
784 94 °C, 5 min, 94 °C for 1 min, at 65 °C for 1 min, 72 °C for 1 min, 72 °C for 10 min, 30 cycles Modarressi & Thong 2010
misL GTCGGCGAATGCCGCGAATA GCGCTGTTAACGCTAATAGT 400 94 °C for 3 min, 94 °C for 1 min, 58 °C for 1 min, 72 °C for 1 min, 72 °C for 5 min, 35 cycles Zishiri, Mkhize & Mukaratirwa 2016
orfL GGAGTATCGATAAAGATGTT GCGCGTAACGTCAGAATCAA 550 94 °C for 3 min, 94 °C for 1 min, 58 °C for 1 min, 72 °C for 1 min, 72 °C for 5 min, 35 cycles Zishiri et al. 2016
spiC CCTGGATAATGACTATTGAT AGTTTATGGTGATTGCGTAT 309 94 °C for 3 min, 94 °C for 1 min, 55 °C for 60 min, 72 °C for 60 min, 72 °C for 5 min, 30 cycles Zishiri et al. 2016

bp, base pairs; min, minute; s, second; h, hour.