TABLE 2.
Scheme1 | GBLUP loci (Panel M) |
Neutral loci (Panel N) |
||||
ΔFHOM2 | ΔFdrift2 | Fhom–Fdrift3 | ΔFHOM2 | ΔFdrift2 | Fhom–Fdrift3 | |
Drift measures | ||||||
GVR2(M,M) | 0.0146 | 0.005 | 0.147 | 0.0103 | 0.0068 | 0.054 |
GVR2(M,D) | 0.01 | 0.0069 | 0.048 | 0.0101 | 0.0068 | 0.05 |
GVR2(~,M) | 0.0109 | 0.005 | 0.093 | 0.0085 | 0.0059 | 0.041 |
GVR1(M,M) | 0.0096 | 0.0056 | 0.063 | 0.008 | 0.0069 | 0.021 |
Gi(p)(M,M) | 0.0051 | 0.0071 | −0.053 | 0.0065 | 0.0077 | −0.031 |
Homozygosity measures | ||||||
G0.5(M,M) | 0.0008 | 0.0213 | −0.348 | 0.0073 | 0.0176 | −0.17 |
GROH(M,M) | 0.0042 | 0.0091 | −0.102 | 0.0054 | 0.0088 | −0.07 |
IBD measures | ||||||
GLA(M,M) | 0.0044 | 0.0049 | −0.009 | 0.0043 | 0.0049 | −0.01 |
A(M,~) | 0.0072 | 0.0083 | −0.016 | 0.007 | 0.0084 | −0.021 |
The target rate of inbreeding for the management of genetic variation was 0.005, and results weigh loci equally irrespective of initial frequency. 1See Table 1 for scheme names. 2Standard errors <2.5 × 10–5. 3Standard errors <2.2 × 10–4.