TABLE 1.
Genes differentially upregulated in human patients and mice
| Gene | Annotation | Log2 FCa | Locus tag |
|---|---|---|---|
| ahpC | Alkyl hydroperoxide reductase, AhpC component | 2.6 | b0605 |
| cspA | Cold shock protein CspA | 4.3 | b3556 |
| dsdX | d-Serine transporter | 2.7 | b2365 |
| fis | DNA-binding transcriptional dual regulator Fis | 2.4 | b3261 |
| ftsB | Cell division protein FtsB | 2.3 | b2748 |
| gntK | d-Gluconate kinase, thermostable | 2.7 | b3437 |
| gpt | Xanthine-guanine phsophoribosyltransferase | 2.4 | b0238 |
| gspH | Hypothetical type II secretion protein GspH | 3.0 | UTI89_C3381 |
| gspL | Hypothetical type II secretion protein GspL | 3.3 | UTI89_C3377 |
| hpt | Hypoxanthine phosphoribosyltransferase | 2.1 | b0125 |
| ibaG | Acid stress protein IbaG | 2.2 | b3190 |
| lysP | Lysine:H(+) symporter | 2.1 | b2156 |
| opgC | Protein required for succinyl modification of osmoregulated periplasmic glucans | 2.6 | b1047 |
| ribE | 6,7-Dimethyl-8-ribityllumazine synthase | 2.1 | b0415 |
| rpmE | 50S ribosomal subunit protein L31 | 2.7 | b3936 |
| suhB | Inositol phosphate phosphatase | 2.6 | b2533 |
| yajG | Putative lipoprotein YajG | 2.6 | b0434 |
| yceA | UPF0176 protein YceA | 3.5 | b1055 |
| yciB | Inner membrane protein | 2.3 | b1254 |
| ydiE | PF10636 family protein YdiE | 2.1 | b1705 |
| yecJ | DUF2766 domain-containing protein YecJ | 2.5 | b4537 |
| yejL | DUF1414 domain-containing protein YejL | 2.2 | b2187 |
| yfaZ | Putative porin YfaZ | 2.9 | b2250 |
| yfhL | Putative 4Fe-4S cluster-containing protein YfhL | 2.6 | b2562 |
| yghD | Putative type II secretion system M-type protein | 3.6 | b2968 |
| yghG | Lipoprotein YghG | 3.3 | b2971 |
| yifK | Putative transporter YifK | 3.6 | b3795 |
| yqcC | DUF446 domain-containing protein YqcC | 2.5 | b2792 |
| yqgF | Ribonuclease H-like domain-containing nuclease | 2.3 | b2949 |
| yqiA | Esterase YqiA | 2.3 | b3031 |
a
FC, fold change.