Table 2.
Detailed description of cavities in the wild type protein
| Sr. No. | Area cavity | Volume of cavity | Amino acids present in cavity |
|---|---|---|---|
| Normal Protein cavities details | |||
| 1 | 126 | 101 | ILE12, MET17, GLY61, SER62, GLY63, GLN67, HIS68, ASP90, ASN91, ARG223, PRO225. |
| 2 | 89 | 59 | ILE165, PHE166, GLU167, GLY168, ASP170, LYS172, ASN173, GLY174, LEU178, THR350, PHE351, HIS352, TYR353, TYR354. |
| 3 | 62 | 32 | GLU196, VAL199, LEU200, ASN203, THR211, ALA213, GLY278. |
| 4 | 42 | 19 | THR32, HIS33, PHE255, GLU257, ASN258, LEU368, VAL369. |
| 5 | 41 | 19 | SER161, ALA162, ILE165, ARG215, HIS282, TYR254. |
| 6 | 40 | 19 | PHE15, GLY221, PRO222, ARG223, ASP224, PRO229, THR378, SER381, LEU385. |
| 7 | 38 | 17 | LEU73, ARG76, TYR78, PHE118, ILE264, ALA267, GLU268 |
| 8 | 35 | 15 | LYS155, LEU156, ILE157, LEU210, THR211, THR212, LEY276. |
| 9 | 33 | 14 | THR116, VAL117, PHE118, LYS155, ILE157, ALA267. |
| Mutated Protein cavities details | |||
| 1 | 127 | 96 | PHE13, MET17, SER62, GLY63, PHE64, GLN67, PHE89, ASP90, ASN91, ARG223. |
| 2 | 99 | 29 | LYS40, ASN42, GLU257, ASN258, HIS261, GLY262, LEU265, TYR365, GLN366, LEU368. |
| 3 | 42 | 20 | PHE166, GLU167, VAL169, LEU347, THR350. |
| 4 | 37 | 16 | VAL199, LEU200, ASN203, ASP204, THR211, GLY278. |
| 5 | 36 | 16 | LEU231, ILE232, PHE294, LEU295, ILE298. |
| 6 | 36 | 16 | VAL70, LEU74, VAL80, VAL82, ASN91, PRO92, GLN93, VAL94. |