Table 4.

Differentially abundant bacteria at the OTU level per increment in AM use of (a) all antimicrobials (AMs) combined and for (b) amoxicillin, (c) amoxicillin-clavulanate and (d) phenoxymethylpenicillin, adjusted for age, gender, language and other AMs (for individual AMs)

	OTUs	baseMean	log2FC		lfcSE	padj	Nearest taxa
a	Otu000108	10.588	− 0.070	↓	0.015	0.010	Incertae Sedis
	Otu000130	4.859	− 0.095	↓	0.021	0.026	Paludibacter
b	Otu000257	0.579	− 2.378	↓	0.360	0.001	Rikenellaceae
c	Otu000257	0.579	− 4.852	↓	0.678	0.001	Rikenellaceae
d	Otu000130	4.859	− 0.216	↓	0.045	0.008	Paludibacter

The log₂fold changes reported are per increment unit AM

baseMean mean of normalised counts of all samples, lfcSE standard error, padj adjusted p value

“↓” symbolises the abundances decrease per use of AM