Skip to main content
. 2020 Jul 20:1–12. doi: 10.1080/07391102.2020.1791958

Table 4.

Expensive molecular docking scores and MM-GBSA binding energies for DB02388 and Darunavir in complex with SARS-CoV-2 main protease (Mpro).

Drug Name/Code Docking Score (kcal/mol) Calculated MM-GBSA binding energy (kcal/mol)
Binding Features (Hydrogen bond length in Å)
ΔEVDW ΔEele ΔEGB ΔESUR ΔGgas ΔGSolv ΔGbinding
DB02388 −11.74 −63.78 −10.93 31.58 −6.54 −74.70 25.03 −49.67 GLU166 (2.10 Å), TYR54 (2.19 Å), ASP187 (2.11 Å)
Darunavir (DB01264) −8.19 −47.37 −15.12 33.82 −6.15 −62.50 27.67 −34.83 GLU166 (1.94 Å, 2.88 Å), LEU167 (1.96 Å)