Table 1.

Best fit parameter estimates for the empirical model.

Untreated animals
Parameter	Animal 1	Animal 2	Animal 3	Animal 4	Animal 5
$V_p$ (copies/mL)	$3.12\times {10}^7$	$7.73\times {10}^7$	$1.61\times {10}^6$	$2.96\times {10}^8$	$5.40\times {10}^7$
95% confidence interval	$(0.464-68.9)\times {10}^7$	$(0.851-65.5)\times {10}^7$	$(0.449-6.66)\times {10}^6$	$(0.918-9.95)\times {10}^8$	$(0.731-121)\times {10}^7$
$t_p$ (d)	1.61	1.33	0.578	1.19	0.582
95% confidence interval	1.23–2.30	1.07–1.68	0.374–1.14	1.06–1.31	0.190–1.02
${\lambda }_g$ (/d)	11.5	14.2	25.9	17.0	31.8
95% confidence interval	7.13–16.13	10.3–18.2	12.3–39.9	14.9–19.3	19.0–94.2
${\lambda }_d$ (/d)	2.75	3.18	1.62	2.26	1.49
95% confidence interval	1.97–3.78	2.50–3.90	1.28–2.07	1.92–2.62	0.807–2.15
SSR	6.58	4.76	2.19	1.22	6.55
95% confidence interval	0.718–6.60	0.0700–6.18	0.256–2.85	0.0710–1.55	0.364–9.07
Treated animals
	Animal 6	Animal 7	Animal 8	Animal 9	Animal 10
$V_p$ (copies/mL)	$1.32\times {10}^6$	$3.38\times {10}^6$	$6.39\times {10}^6$	$4.46\times {10}^7$	$8.70\times {10}^7$
95% confidence interval	$(0.259-10.9)\times {10}^6$	$(1.14-11.5)\times {10}^6$	$(0.810-147)\times {10}^6$	$(1.18-17.6)\times {10}^7$	$(5.06-20.1)\times {10}^7$
$t_p$ (d)	1.23	1.04	0.533	1.13	0.999
95% confidence interval	0.460–1.63	0.493–1.19	0.110–1.19	0.573–1.31	0.563–1.10
${\lambda }_g$ (/d)	12.0	15.1	30.7	16.2	19.0
95% confidence interval	8.03–30.8	13.1–31.5	13.2–166	13.9–30.5	17.3–34.0
${\lambda }_d$ (/d)	0.457	0.789	0.680	1.66	1.40
95% confidence interval	0.0128–1.08	0.479–1.13	0.0772–1.41	1.25–2.09	1.19–1.62
SSR	3.78	1.15	6.43	1.72	0.520
95% confidence interval	0.423–4.71	0.144–1.20	0.506–9.55	0.123–1.91	0.0579–0.564