Table 8. Binding energy of predicted epitopes with selected MHC class I and MHC class II molecules generated from molecular docking by AutoDock.
| Protein | Epitope | MHC Class | Binding Energy |
|---|---|---|---|
| Sensor histidine protein kinase | FNAQDEEGH | HLA-A*11:01 | -8.6 |
| GGRHNNLDL | -9.1 | ||
| KPSPNFQAEV | -8.2 | ||
| DSIESSFNAQDEEGH | HLA-DRB1*04:01 | -7.3 | |
| IGGRHNNLDLMDGAH | -6.5 | ||
| KLSDDPMASIKLLNL | -6.3 | ||
| Flagellar hook-associated protein | AILLFPFAL | HLA-A*11:01 | -8.3 |
| ILLFPFALR | -8.1 | ||
| HDDGVGFKV | -8.1 | ||
| ILLFPFALRLGIALH | HLA-DRB1*04:01 | -7.0 | |
| AILLFPFALRLGIAL | -6.4 | ||
| LLFPFALRLGIALHT | -7.2 |