Table 1.

List of ELIXIR’s Core Data Resources

Resource names	Overview	References
ArrayExpress	Data from high-throughput functional genomics experiments	Athar et al. (2019)
BRENDA	Database of enzyme and enzyme–ligand information	Jeske et al. (2019)
CATH	Hierarchical domain classification of protein structures PDB	Sillitoe et al. (2019)
ChEBI	Dictionary of molecular entities focused on ‘small’ chemical compounds	Hastings et al. (2016)
ChEMBL	Database of bioactive drug-like small molecules	Mendez et al. (2019)
EGA	Personally identifiable genetic and phenotypic data	Lappalainen et al. (2015)
ENA	Nucleotide sequencing information	Harrison (2019)
Ensembl	Genome browser for vertebrate genomes	Cunningham et al. (2019)
Ensembl Genomes	Genome browser for non-vertebrate genomes, with sites for bacteria, protists, fungi, plants and invertebrate Metazoa	Kersey et al. (2018)
Europe PMC	Repository to life sciences articles, books, patents and clinical guidelines	Levchenko et al. (2018)
Human Protein Atlas	Information on human protein-coding genes	Uhlén et al. (2015)
IMEx Consortium (IntAct and MINT)	IntAct: experimentally verified molecular interactions MINT: experimentally verified protein–protein interactions	Orchard et al. (2012)
InterPro	Functional analysis of protein sequences	Mitchel et al. (2019)
Orphadata	Comprehensive, high-quality datasets related to rare diseases	Rath et al. (2012)
PDBe	Biological macromolecular structures	Mir et al. (2018)
PRIDE	Mass spectrometry-based proteomics data	Perez-Riverol et al. (2019)
SILVA	Resource for quality checked and aligned ribosomal RNA sequence data	Glöckner et al. (2017)
STRING	Known and predicted protein–protein interactions.	Szklarczyk et al., (2019)
UniProt	Comprehensive resource for protein sequence and annotation data	UniProt Consortium (2019)