| Chemicals, Peptides, and Recombinant Proteins |
|
|
| Sodium beta-hydroxybutyrate |
Sigma |
Cat#54965 |
| Matrigel™ |
Corning |
Cat#356231 |
| DMEM/F12 |
Life Technologies |
Cat#12634-010 |
| Murine Egf |
Peprotech |
Cat#315-09 |
| R-Spondin |
Peprotech |
Cat#120-38 |
| Murine Noggin |
Peprotech |
Cat #250-38 |
| N-acetyl-L-cysteine |
Sigma |
Cat #A9165 |
| N2 |
Life Technologies |
Cat #17502048 |
| B27 |
Life Technologies |
Cat #12587010 |
| Y-27632 |
Abcam |
Cat #ab120129 |
| Jagged-1 |
Anaspec |
Cat #ANA61298
|
| γ-secretase inhibitor MK-0752 |
Cayman Chemical Company |
Cat#471905-41-6 |
| Hymeglusin |
Sigma |
Cat#SML0301 |
| Critical Commercial Assays |
|
|
| Alcian Blue stain kit |
Vector Laboratories |
Cat#H-3501 |
| II1β ELISA |
R&D Systems |
Cat#DY401 |
| HRM peptides |
Biognosys AG |
Cat#42896 |
| Deposited Data |
|
|
| Proteomics datasets |
ProteomeXchange |
PXD014311 |
| Experimental Models: Organisms/Strains |
|
|
| Mouse: Lgr5-ki-eGFP-creERT2 |
K.L. Rudolph, FLI |
Barker et al., 2007 |
| Mouse: Hmgcs2loxp/loxp;UBC-creERT2 |
Ö.H. Yilmaz, MIT |
Cheng et al., 2019 |
| Software and Algorithms |
|
|
| Spectronaut™ |
Biognosys AG |
Sw-3001 |
| Xcalibur v4.1 |
ThermoFisher Scientific |
RRID:SCR_014593 |
| Prism v8.3 |
GraphPad |
RRID: SCR_002798 |
| RStudio v1.1.4 |
RStudio, Inc. |
RRID: SCR_000432 |
| ZEN Blue v2.6 |
Zeiss |
RRID:SCR_013672 |
| Other |
|
|
| R shiny web app for proteomics data |
this paper |
https://orilab.shinyapps.io/IntestineAging/ |
