Table 9. Predictive performance of different approaches based on the variance-stability transformation and the binary transformation for the gut microbiome data related to PD.

Dataset	Variance-stability transformation			Binary transformation
Method	ER	AUC	AUPRC	ER	AUC	AUPRC
LASSO	0.248	0.811	0.872	0.221	0.812	0.856
ZINB+GLM	0.291	0.720	0.771	0.318	0.706	0.758
TPNB+GLM	0.352	0.663	0.725	0.318	0.703	0.754
NB+GLM	0.268	0.743	0.765	0.264	0.758	0.768
ZINB+LASSO	0.249	0.801	0.861	0.199	0.872	0.912
TPNB+LASSO	0.256	0.810	0.873	0.218	0.853	0.890
NB+LASSO	0.222	0.810	0.871	0.249	0.787	0.818