Table 1.
Major Hormone Receptor Hydrogen Bonds During MD Simulation
| TSH-β | |||
|---|---|---|---|
| TSHR ECD Residue | TSHβ Residue | % Bonded | Lifetime (ns) |
| Glu (E) 32 | Lys (K) 127 | 53.7 | >200 |
| Tyr (Y) 53 | Glu (E) 118a | 89.7 | >200 |
| Arg (R) 83 | Glu (E) 32 | 99.8 | >200 |
| Lys (K) 100 | Asp (D) 114 | 97.1 | >200 |
| Asp (D) 122 | Lys (D) 64 | 96.6 | >200 |
| Asp (D) 131 | Lys (D) 33 | 99.4 | >200 |
| Lys (K) 182 | VAL (V) 138a | 74.7 | >200 |
| TSH-βv | |||
| TSHR ECD Residue | TSHβ Residue | % Bonded | Lifetime (ns) |
| Arg (R) 9 | Glu (E) 118a | 98.7 | >200 |
| Glu (E) 32 | Arg (R) 80 | 97.2 | >200 |
| Arg (R) 51 | VAL (V) 138a | 89.2 | >200 |
Note: aResidues are common receptor residues.
Abbreviation: ns, nanosecond.