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. 2020 Aug 25;9:e56664. doi: 10.7554/eLife.56664

Table 5. Quantification of interfaces within the γ-carbonic-anhydrase (γCA) domain and between γCA and the proximal pumping domain (PP) of CI*.

Interface residues, surface areas, solvation free energies and P-values were determined by uploading the molecular model of CI* into the the PDBePISA tool for the exploration of macromolecular interfaces (Krissinel and Henrick, 2007). The table with the full list of interaction surfaces for CI* was filtered for the interfaces involving CA1, CA2 or CAL2. Total values were obtained by adding the relevant two-way interactions, as per PDBePISA guidelines.

Subunit 1 Subunit 2 Inter-subunit interface
Subunit # Interfacing residues Interfacing surface area (Å2) Subunit # Interfacing residues Interfacing surface area (Å2) Interface surface area (Å2) Interface solvation free energy (kcal/mol) Solvation free energy gain P-value
Within γCA domain
CA1 88 20,989 CA2 80 22,088 2581.4 −45.6 0.000
CA1 79 20,989 CAL2 72 20,073 2637.8 −38.2 0.001
CA2 73 22,088 CAL2 66 20,073 2148.1 −33.2 0.000
Total 7367.3 −117
Between γCA domain and membrane arm (PP)
NU2M 16 7610 CA1 16 20,989 259.2 −17.1 0.001
NU2M 16 7610 CA2 16 22,088 261.1 −17.1 0.001
NU2M 16 7610 CAL2 16 20,073 263.6 −18.0 0.003
NDUC2 21 13,708 CA1 21 20,989 427.8 −20.2 0.000
NDUC2 16 13,708 CA2 16 22,088 242.3 −15.8 0.000
NDUC2 21 13,708 CAL2 22 20,073 416.2 −18.7 0.000
P2 21 10,433 CA1 21 20,989 362.6 −16.5 0.000
P2 26 10,433 CA2 22 22,088 512.7 −21.5 0.001
P2 17 10,433 CAL2 17 20,073 244.6 −16.8 0.001
NDUX1 16 13,955 CA1 16 20,989 236.5 −15.9 0.000
NDUX1 17 13,955 CA2 17 22,088 268.1 −15.0 0.000
NDUX1 16 13,955 CAL2 16 20,073 240.9 −16.7 0.000
Total 3735.6 −209.3