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. Author manuscript; available in PMC: 2020 Aug 26.
Published in final edited form as: Proteins. 2012 Jan 31;80(4):1239–1249. doi: 10.1002/prot.24022

Figure 4.

Figure 4

(a) The change in the total number of near native and acceptable models predicted by PRISM with the default parameters and the hot spot threshold relaxed parameters versus the sequence similarity elimination thresholds between the target proteins and template-interface partners. At 100% sequence similarity, template interfaces from native complexes in the Docking Benchmark are excluded. (b) The distribution of the I-Score versus calculated global energies (∆Gcalc) and I-Score versus combined matching score (total of 0.6 × fhotspot + 0.4 × fmatch for each matching side of the template interface) values for predicted complexes. [Color figure can be viewed in the online issue, which is available at wileyonlinelibrary.com.]