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. 2020 Jun 2;9(1):1046–1054. doi: 10.1080/22221751.2020.1765704

Table 4. Sequence identities between duck-origin goose astrovirus AStV-SDTA strain with selected representative.

  AstV-SDTA
ORF 1a ORF 1b ORF 2 Complete sequence
Strain nt aa nt aa nt aa nt
AstV-SDLC 99.7 99.6
AstV-JSXZ 99.5 99.3
AstV-HNZZ 99.7 99.4
GAstV FLX 54.3 47.5 64.3 64.3 49.3 40.4 54.2
TAstV CO/01 61.2 59.3 69.2 72.4 58.9 56.2 61.7
TAstV PA/01 61.3 59.6 68.8 72.8 58.6 56.2 61.6
TAstV-1 50.9 40.8 60.1 57.6 47.7 38.5 52.1
DAstV DA08 54.9 47.6 65.9 67.9 60.3 55.9 58.3
DAstV DA93 55.4 47.8 64.9 68.4 59.9 55.7 58.2
DAstV WF1201 55.2 47.9 65.3 67.7 60.7 55.7 58.4
DAstV SL5 62.7 58.3 68.8 71.7 50.2 37.4 59.1
CAstV 4175 56.9 48.1 65.9 60.0 45.7 29.5 54.6
CAstV GA2011 56.8 48.4 65.5 68.4 47.7 35.3 55.2
GoAstV SDPY 98.6 99.3 99.8 97.9 99.1 97.9 98.2
GoAstV SD01 98.5 99.8 99.2 96.5 98.5 96.6 98.3
GoAstV HING 97.2 99.8 99.1 99.1 97.2 97.5 97.2
GoAstV CXZ 98.3 99.2 99.5 99.5 99.2 99.0 98.8
GoAstV JSHA 98.1 99.1 99.5 99.5 98.7 98.9 98.2

Note: aa: amino acid sequence; nt: nucleotide sequence.