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. 2020 Aug 14;16(8):e1008927. doi: 10.1371/journal.pgen.1008927

Fig 1. A comparison of R2 between prediction and measurement in SAGE, with PredictDB test metrics as benchmarks, for 11,545 genes total.

Fig 1

The prediction weights used here are, from left to right: GTEx v6p, GTEx v7, DGN, MESA African Americans, MESA African Americans and Hispanics, MESA Caucasians, and all MESA subjects. Test R2 from model training in GTEx 7 and MESA (“test_R2_avg” in PredictDB) appear on the right and provide a performance baseline. The number of genes per weight set varies; see S1 Table.