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. 2020 Aug 11;5(33):21094–21103. doi: 10.1021/acsomega.0c02744

Table 2. pKa Values of Individual Nitrogen Atoms of Kanamycin B Determined Using 1H, 13C, and 15N HMBC NMR Spectroscopy and Then Compared with the Published Data, as Indicated.

  individual nitrogen atoms pKa
method N-1 N-3 N-2′ N-6′ N-3″
1H NMRa 8.12 6.04   9.03 7.46
1H NMRb 8.16 6.71 7.35 8.93c 7.60
13C NMRb 8.10 6.80 7.40 9.10 7.70
15N HMBC NMRb 8.05 6.85 7.35 8.90 7.65
a

pKa values of individual nitrogen atoms of kanamycin A (note, which lacks an N-2′ amine) determined using 1H NMR spectroscopy in D2O relative to TSP at 25 °C.15 Note also that there are no literature data for the pKa values of kanamycin B.

b

This work.

c

The pKa value of N-6′ of kanamycin B determined using 1H NMR spectroscopy (in this work) is the average pKa of the values of N-6′ obtained using 1H NMR spectroscopic data for 6′a (8.95) and 6′b (8.90).