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. 2019 Dec 16;11(1):18–29. doi: 10.1039/c9md00396g

Table 2. Structural requirements of the binding pocket can guide scaffold-hopping. Pennington et al.47 showed that binding to a hydrophobic pocket called for the incorporation of a fluoropyridine rather than a similarly stable pyrimidine. RLM: rat liver microsomes.

Inline graphic
Entry Compound X Y RLM Clint (μL min–1 mg–1) clog P
1 6a N CH 130 3.1
2 6b CH N 67 3.1
3 6c N N 28 2.3
4 6d CF N 26 3.2