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. 2020 Aug 21;6(8):e04715. doi: 10.1016/j.heliyon.2020.e04715

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© 2020 The Author(s)

This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).

PMC Copyright notice

Phylogeny of the mature sequences of all known circular bacteriocins. The bacteriocins cluster into two main groups. Plantacyclin B21AG clusters within subgroup ii. Subgroup i contains the most variation of circular bacteriocins. Bootstrap values are shown. Asterisk shows plantacyclin B21AG. Tree based on amino acid sequence alignment without signal sequences. The sequences of family ii were permuted by 3 residues to better align with family i, built in RAxML then visualised in FigTree.