Antibodies |
|
Anti-human/mouse BCL6 PerCP-Cy5.5 |
Biolegend |
RRID:AB_2566191
|
Anti-human CD279 PE |
Biolegend |
RRID:AB_940483
|
Anti-human CD3 BV421 |
Biolegend |
RRID:AB_2565849
|
Anti-human CD4 BV510 |
Biolegend |
RRID:AB_2561377
|
Anti-human CD8 APC |
Biolegend |
RRID:AB_2075390
|
Anti-human CD185 BV711 |
Biolegend |
RRID:AB_2629525
|
Anti-human CD278 BV650 |
Biolegend |
RRID:AB_2749928
|
Anti-human CD45RA APC-Cy7 |
Biolegend |
RRID:AB_10708419
|
Anti-human CD45RO PE-Cy7 |
Biolegend |
RRID:AB_11203903
|
Anti-human FOXP3 AF488 |
Biolegend |
RRID:AB_430882
|
Anti-human CD25 BV785 |
Biolegend |
RRID:AB_11219197
|
Anti-human CD45 AF488 |
Biolegend |
RRID:AB_493033
|
Anti-human CD20 BV650 |
Biolegend |
RRID:AB_11218609
|
Anti-human CD27 BV785 |
Biolegend |
RRID:AB_2562674
|
Anti-human CD38 APC-Cy7 |
Biolegend |
RRID:AB_2562576
|
Anti-human CD138 BV421 |
Biolegend |
RRID:AB_2562659
|
Anti-human IgG Fc APC |
Biolegend |
RRID:AB_11150590
|
Anti-human IgM PE-Cy7 |
Biolegend |
RRID:AB_2566484
|
Anti-human IgD BV510 |
Biolegend |
RRID:AB_2561386
|
Anti-human CD21 PerCP-Cy5.5 |
Biolegend |
RRID:AB_2561543
|
Anti-human CD45 BV785 |
Biolegend |
RRID:AB_2715888
|
Anti-human CD3 BV605 |
Biolegend |
RRID:AB_11126166
|
Anti-human CD19 BV711 |
Biolegend |
RRID:AB_2562062
|
Anti-human CD56 AF488 |
Biolegend |
RRID:AB_2564093
|
Anti-human CD11b PerCP-Cy5.5 |
Biolegend |
RRID:AB_10900072
|
Anti-human CD68 APC-Cy7 |
Biolegend |
RRID:AB_2571964
|
Anti-human CD14 PE-Cy7 |
Biolegend |
RRID:AB_830690
|
Anti-human CD1c APC |
Biolegend |
RRID:AB_10718511
|
Anti-human HLA-DR BV421 |
Biolegend |
RRID:AB_10897449
|
Anti-human CD16 BV510 |
Biolegend |
RRID:AB_2562085
|
Anti-human CD56 BV421 |
Biolegend |
RRID:AB_10900228
|
Anti-human CD27 AF488 |
Biolegend |
RRID:AB_2565545
|
Anti-human CD107a AF647 |
Biolegend |
RRID:AB_1227506
|
Anti-human CD107a PE-Cy7 |
Biolegend |
RRID:AB_11147955
|
Anti-human CD3 PE |
Biolegend |
RRID:AB_314044
|
Anti-human CD19 APC |
Biolegend |
RRID:AB_314242
|
Anti-human CD4 BV711 |
Biolegend |
RRID:AB_11219404
|
Anti-human CXCR5 BV785 |
Biolegend |
RRID:AB_2629527
|
Anti-human CXCR5 AF488 |
Biolegend |
RRID:AB_2561894
|
Anti-human CD279 BB700 |
BD Biosciences |
RRID:AB_2744348
|
Anti-human CD19 BV421 |
Biolegend |
RRID:AB_10897802
|
Anti-human CD3 PE-Cy7 |
Biolegend |
RRID:AB_439781
|
Anti-human CXCR5 BB700 |
BD Biosciences |
RRID:AB_2739739
|
Anti-human CD127 PE-Cy7 |
Biolegend |
RRID:AB_10899414
|
Anti-human PD-1 APC |
Biolegend |
RRID:AB_940475
|
Anti-human FOXP3 eF450 |
Thermo Fisher |
RRID:AB_1834364
|
Anti-human CD274 PE |
Biolegend |
RRID:AB_940368
|
Anti-human CD274 APC |
Biolegend |
RRID:AB_2749927
|
Anti-human PD-L1 |
R&D Systems |
RRID:AB_2073445
|
Normal goat IgG control Antibody |
R&D Systems |
RRID:AB_354267
|
Anti-human CD3 |
Bio X Cell |
RRID:AB_1107632
|
|
Bacterial and Virus Strains |
|
DH5α E. coli
|
NEB |
Cat# C2987H |
XL10 Gold E. coli
|
Agilent |
Cat# 200315 |
Stbl3 E. coli
|
Invitrogen |
Cat# C737303 |
StellarComp E. coli
|
Clontech |
Cat# 636763 |
VSV-G pseudotyped lentiviral vector |
Viral Vector Core, Cincinnati Children’s Hospital Medical Center |
https://www.cincinnatichildrens.org/research/cores/translational-core-laboratory/viral-vector-core/team |
|
Biological Samples |
|
Human tonsillar tissue |
Division of Pediatric Otolaryngology-Head and Neck Surgery (Cincinnati Children’s Hospital Medical Center) |
https://www.cincinnatichildrens.org/research/divisions/o/otolaryngology |
Human cord blood |
Cell Manipulations Laboratory & Cell Processing Core (Cincinnati Children’s Hospital Medical Center) |
https://www.cincinnatichildrens.org/research/cores/translational-core-laboratory/cell-manipulations-laboratoryhttps://www.cincinnatichildrens.org/research/cores/translational-core-laboratory/cell-processing-core
|
Leukocyte reduction filters (source of human PBMC) |
University of Cincinnati Hoxworth Blood Center |
https://hoxworth.org/ |
|
Chemicals, Peptides, and Recombinant Proteins |
|
Collagenase D |
Roche |
Cat# 11088793001 |
Recombinant Human IL-2 |
Peprotech |
Cat# 200-02 |
DNase 1 |
Millipore Sigma |
Cat# 11284932001 |
Ficoll-Paque PLUS |
GE Healthcare |
Cat# 17144002 |
BD Cytofix Fixation Buffer |
BD Biosciences |
Cat# 554655 |
BD Cytofix/Cytoperm Fixation and Permeabilization Solution |
BD Biosciences |
Cat# 554714 |
Perm/Wash Buffer |
BD Biosciences |
Cat# 554723 |
Ampicillin |
GoldBio |
Cat# A-301-25 |
Kanamycin |
GoldBio |
Cat# K-120 |
T4 DNA Ligase |
New England BioLabs |
Cat# M0202S |
Human Fibronectin |
Invitrogen |
Cat# PHE0023 |
Protamine Sulfate |
Fisher |
Cat# ICN10275205 |
Blasticidin |
Fisher |
Cat# K515001 |
Puromycin |
GIBCO |
Cat# A1113803 |
rhPD-1-Fc |
R&D Systems |
Cat# 1086-PD-050 |
IgG1-Fc |
R&D Systems |
Cat# 110-HG-100 |
PMA |
Sigma-Aldrich |
Cat# P8139 |
Ionomycin |
Sigma-Aldrich |
Cat# I9657-1MG |
Zombie UV Dye |
Biolegend |
Cat# 423107 |
SEB |
EMD Millipore |
Cat# 324798; CAS# 11100-45-1 |
Calcein AM Solution |
Fisher |
Cat# C34852
|
Propidium Iodide |
Biolegend |
Cat# 421301 |
Chromium-51 |
Perkin Elmer |
Cat# NEZ030S002MC |
CellTrace Violet |
Invitrogen |
Cat# C34557
|
Pristane |
Sigma-Aldrich |
Cat# P9622-10X1ML |
Bulsulfan |
Sigma-Aldrich |
Cat# B2635-25G |
UltraComp eBeads Compensation Beads |
ThermoFisher |
Cat# 01-2222-42 |
|
Critical Commercial Assays |
|
DES Blasticidin Support Kit |
Invitrogen |
Cat# K515001 |
DES-Inducible Kit with pCoBlast |
Invitrogen |
Cat# K512001 |
GeneJET Gel Extraction kit |
ThermoFisher |
Cat# K0692 |
QIAprep Mini, Midi, Maxi Kits |
QIAGEN |
Cat# 27106, 12943, 12362 |
Rneasy Mini Kit |
QIAGEN |
Cat# 74104 |
iScript cDNA Synthesis Kit |
Bio-Rad |
Cat# 170-8891 |
PrimeTime Gene Expression Master Mix |
IDT Technologies |
Cat# 1055770 |
TaqMan Gene Expression Assay |
ThermoFisher |
Cat# 4331182 |
Easy Sep Human CD4+ T cell Isolation kit |
StemCell Technologies |
Cat# 17952 |
Easy Sep Human B cell Isolation kit |
StemCell Technologies |
Cat# 17954 |
Human IgG total ELISA Ready-SET-Go! Kit |
eBioscience |
Cat# 50-112-8669 |
|
Experimental Models: Cell Lines |
|
Drosophila S2 cell line |
ThermoFisher |
Cat# R69007
|
HEK293T cell line |
ATCC |
RRID:CVCL_0063 |
NK-92 cell line |
ATCC |
RRID:CVCL_2142 |
Raji cell line |
ATCC |
RRID:CVCL_0511 |
|
Experimental Models: Organisms/Strains |
|
Mouse: NOD.Cg-Prkdcscid Il2rgtm1Wjl Tg(CMV-IL3,CSF2,KITLG)1Eav/MloySzJ |
Wunderlich et al., 201050
|
RRID:IMSR_JAX:013062 |
|
Oligonucleotides |
|
Primer/probe sets for CAR expression qPCR |
This paper |
Table S1 |
Sequencing primers PD-L1 CAR plasmid |
This paper |
Table S1 |
Sequencing primers PD-1 pAc/V5-His plasmid |
This paper |
Table S1 |
Sequencing primers PD-1 PB513 plasmid |
This paper |
Table S1 |
|
Recombinant DNA |
|
Human PDL1-CD28-CD3ζ chimeric antigen receptor |
This paper |
n/a |
Human PD-1 protein sequence |
Uniprot (a.a. 1-288) |
n/a |
pLVX-IRES-ZsGreen1 Vector |
Clontech |
Cat# 632187 |
pUC57-Kan plasmid vector |
GeneWiz |
n/a |
pAc5.1/V5-His A Plasmid Vector |
Invitrogen |
Cat# V411020 |
PiggyBac Transposon, Cloning and Expression Vector |
System Biosciences |
Cat# PB513B-1 |
Super PiggyBac Transposase Expression Vector |
System Biosciences |
Cat# PB210PA-1 |
pcDNA3.1/His/lacZ |
Invitrogen |
Cat# V38520 |
pAc5.1/V5-His A |
Invitrogen |
Cat# V411020 |
|
Software and Algorithms |
|
Sony SH800S Cell Sorter acquisition software |
Sony Biotechnologies |
https://www.sonybiotechnology.com/us/instruments/sh800s-cell-sorter/software/ |
Snapgene |
GSL Biotech |
https://www.snapgene.com/ |
Molecular Biology tool |
Benchling |
https://www.benchling.com/ |
“Codon Optimization Tool” |
IDT Technologies |
https://www.idtdna.com/pages/tools |
NIS-Elements Imaging Software |
Nikon |
https://www.microscope.healthcare.nikon.com/products/software |
FACSDiva |
BD Biosciences |
https://www.bdbiosciences.com/en-us/instruments/research-instruments/research-software/flow-cytometry-acquisition/facsdiva-software |
FlowJo v.10 Software |
TreeStar Inc. |
https://www.flowjo.com/ |
Prism 7 |
GraphPad |
https://www.graphpad.com/scientific-software/prism/ |
Nonlinear Regression (curve fit) |
GraphPad Prism |
https://www.graphpad.com/guides/prism/7/curve-fitting/index.htm?REG_DR_stim_variable_2.htm. |