Table 4.
Eterna OpenVaccine rounds, included mRNA design challenges, default folding engine, and default metrics provided to participants.
| Title | Constructs | Metrics provided | Default folding engine | URL |
|---|---|---|---|---|
| [Lightning Round] Eterna takes on the Coronavirus | MEV, eGFP | ΔG(MFE), ΔG(ensemble) | ViennaRNA | https://eternagame.org/labs/9818634 |
| [Round 2] Design of eGFP and epitope mRNA molecules | MEV, eGFP | ΔG(MFE), ΔG(ensemble) | ViennaRNA | https://eternagame.org/labs/9833861 |
| [Round 3-extended] Lightning Round Design + Vote of Nanoluciferase | eGFP, Nluc | ΔG(MFE), ΔG(ensemble) | ViennaRNA | https://eternagame.org/labs/9874218 |
| [Round 4] The 5’ UTR Design Lab | UTR design (not discussed here) | ΔG(MFE), ΔG(ensemble), # hairpins, longest stem, GC content | ViennaRNA | https://eternagame.org/labs/10027854 |
| [Computational lab] Eterna vs. Computers, p(unp) | MEV, Nluc, eGFP, Spike RBD | ΔG(MFE), ΔG(ensemble), AUP | LinearFold/LinearPartition (ViennaRNA) | https://eternagame.org/labs/10097602 |
| [Special Design Challenge] Humans vs. Computers take on the full spike protein | JEV+S | ΔG(MFE), ΔG(ensemble), # unpaired nucleotides | LinearFold/LinearPartition (ViennaRNA) | https://eternagame.org/labs/10126540 |
| Round 7 | S-2P | DegScore, DegScore Leaderboard, “branchiness”, Codon Usage, 3-way junctions, # hairpins, longest hairpin stem, GC content, energy of first 14 nts | LinearFold/LinearPartition (EternaFold) | https://eternagame.org/labs/10506533 |