Table 4. Unaligned reads identified by ROP in the simulated dataset.
Dataset | Unaligned reads
identified |
Low Quality
Reads |
Low Complexity
Reads |
rRNA
reads |
Lost
Reads |
Repeat
reads |
NCL
Reads |
Immune
Reads |
Microbial
Reads |
---|---|---|---|---|---|---|---|---|---|
T1 | 31,469 | 1 | 188 | 251 | 30,398 | 502 | 9 | 120 | 1 |
T2 | 27,328 | 0 | 306 | 148 | 23,508 | 1,690 | 28 | 1,639 | 9 |
T3 | 58,544 | 3 | 2,469 | 13 | 3,085 | 7,123 | 132 | 45,696 | 24 |
The result shown is an average from 3 samples.