| ACT | actinorhodin |
| AGOS | artificial gene operon assembly system |
| AICE | actinomycetes integrative and conjugative elements |
| aMSGE | advanced multiplexed site-specific genome engineering |
| BAC | bacterial artificial chromosome |
| BGC | biosynthetic gene cluster |
| CATCH | Cas9-assisted targeting of chromosome segments |
| CRISPR/Cas | clustered regularly interspaced short palindromic repeats/CRISPR associated |
| crRNA | CRISPR RNA |
| DiPaC | Direct pathway cloning |
| DSB | double-strand break |
| DNA | deoxyribonucleic acid |
| gDNA | genomic DNA |
| GFP | green fluorescent protein |
| GusA | glucuronidase |
| HDR | homology directed repair |
| HE | homing endonuclease |
| MCS | multiple cloning site |
| mRNA | messenger RNA |
| MSGE | multiplexed site-specific genome engineering |
| NHEJ | non-homologous end joining |
| NRPS | nonribosomal peptide synthetase |
| OTC | oxytetracycline |
| PCR | polymerase chain reaction |
| PKS | polyketide synthase |
| PTM | polycyclic tetramate macrolactam |
| qPCR | quantitative PCR |
| RBS | ribosome binding sites |
| Real-time RT-PCR | real-time reverse-transcription quantitative polymerase |
| RNA | ribonucleic acid |
| SD | Shine-Dalgarno |
| SEVA | standard European vector architecture |
| sgRNA | synthetic guide RNA |
| SLIC | sequence- and ligation-independent cloning |
| TAR | transformation associated recombination |
| tracrRNA | trans-activating CRISPR RNA |
| UTR | untranslated region |
| YAC | yeast artificial chromosome |