N	Nitrogen
NUE	Nitrogen use efficiency
DEG	Differentially expressed genes
QTL	Quantitative trait loci
TF	Transcription factor
PK	Pokkali
BG	Bengal
PKFN	Pokkali-Full nitrogen
PKLN	Pokkali-low nitrogen
PK1H	Pokkali-1h after transfer from low N to full N
BGFN	Bengal-full nitrogen
BGLN	Bengal-low nitrogen
BG1H	Bengal-1h after transfer from low N to full N
GO	Gene ontology
SEA	Singular enrichment analysis
CEP	C-terminally encoded peptides
CLE	CLV3/ESR-related
rtnb	Root number
rtlg	Root length
rtth	Root thickness
rtvol	Root volume
rtdp	Root depth
kclo3rs	Potassium chlorate resistance
AS	Alternate splicing
IR	Intron retention
A3SS	Alternative 3′ splice site
ES	Exon skipping
A5SS	Alternative 5′ splice site
MXE	Mutually exclusive exon
GOGAT	Glutamine oxoglutarate aminotransferase
qRT-PCR	Quantitative reverse transcription PCR
NIGT1	Nitrate-Inducible, GARP-type Transcriptional Repressor 1
GID1	GA insensitive dwarf1
NGR5	Nitrogen-mediated tiller growth response 5
PRC2	Polycomb repressive complex 2