Table 3.
Nitrogen uptake and metabolism-related DEGs of Pokkali and Bengal in response to low N and early (1-h) recovery conditions.
| Function | MSU ID | Description | Low N | Early N Recovery | Low N | Early N Recovery |
|---|---|---|---|---|---|---|
| Pokkali | Bengal | |||||
| Nitrate transporters | LOC_Os10g40600 | Nitrate transporter 1.1B | - | U | - | U |
| LOC_Os02g02170 | High-affinity nitrate transporter 2.1 | U | U | - | U | |
| LOC_Os02g02190 | High-affinity nitrate transporter 2.2 | U | U | U | U | |
| LOC_Os01g50820 | High-affinity nitrate transporter 2.3 | U | - | U | - | |
| Ammonium transporter | LOC_Os02g40730 | Ammonium transporter 1 member 2 | D | U | - | U |
| Nitrate reductase | LOC_Os08g36480 | Nitrate reductase 1 | - | - | - | U |
| LOC_Os08g36500 | Nitrate reductase 2 | - | - | - | U | |
| LOC_Os02g53130 | NADH/NADPH-dependent NO3-reductase 2 | D | U | D | U | |
| Glutamine synthetase | LOC_Os03g12290 | Glutamine synthetase 1;2 | D | U | D | U |
| GOGAT | LOC_Os01g48960 | NADH-GOGAT | - | U | - | U |
U: upregulated; D: downregulated; ‘-‘: not differentially expressed.