Table 4.
Numbers of transcription factors (TFs) differentially expressed in Pokkali and Bengal under low N and early (1-h) recovery conditions.
| TF Family | Description | Low N | Early N Recovery | Low N | Early N Recovery |
|---|---|---|---|---|---|
| Pokkali | Bengal | ||||
| AP2 | AP2 family protein | 1 | 0 | 0 | 0 |
| B3 | B3 family protein | 0 | 0 | 3 | 1 |
| bHLH | basic/helix-loop-helix family proteins | 10 | 5 | 6 | 7 |
| bZIP | bZIP family protein | 3 | 6 | 0 | 6 |
| C2H2 | C2H2 zinc finger domain | 9 | 6 | 5 | 3 |
| C3H | Cys3His -containing zinc finger domain | 0 | 1 | 0 | 0 |
| CO-like | CO (CONSTANS) family protein | 1 | 1 | 0 | 1 |
| Dof | Dof (DNA binding with one finger) family | 2 | 0 | 0 | 0 |
| EIL | Ethylene-insensitive3 (EIN3) and EIN3-like (EIL) family proteins | 0 | 2 | 0 | 1 |
| ERF | ERF family protein | 9 | 18 | 8 | 15 |
| FAR1 | FAR1 family protein | 1 | 0 | 1 | 1 |
| G2-like | G2-like family protein | 5 | 3 | 1 | 0 |
| GATA | GATA family protein | 2 | 0 | 2 | 1 |
| GRAS | GRAS family protein | 1 | 0 | 1 | 1 |
| GRF | GROWTH-REGULATING FACTOR family protein | 0 | 1 | 0 | 1 |
| HD-ZIP | HD-ZIP family protein | 0 | 3 | 3 | 1 |
| HSF | Heat stress transcription factors | 1 | 1 | 0 | 1 |
| LBD | LBD family protein | 2 | 5 | 3 | 4 |
| MIKC-MADS | MIKC-MADS family protein | 1 | 0 | 1 | 0 |
| M-type MADS | M-type MADS family protein | 0 | 0 | 0 | 1 |
| MYB | MYB family protein | 8 | 1 | 4 | 4 |
| MYB-related | MYB-related family protein | 3 | 2 | 2 | 2 |
| NAC | NAM, ATAF, and CUC (NAC) transcription factors | 8 | 3 | 7 | 3 |
| NF-YA | NF-YA family protein | 2 | 0 | 2 | 0 |
| NF-YB | NF-YB family protein | 0 | 1 | 0 | 1 |
| Nin-like | Nin (for nodule inception)-like family protein | 1 | 1 | 1 | 0 |
| RAV | RAV family protein | 0 | 1 | 0 | 1 |
| SBP | SQUAMOSA promoter binding proteins (SBPs) | 1 | 0 | 1 | 0 |
| WOX | WOX family protein | 0 | 1 | 0 | 0 |
| WRKY | WRKY family protein | 17 | 2 | 9 | 9 |
| Total | 88 | 64 | 60 | 65 | |