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. 2020 Aug 15;21(16):5862. doi: 10.3390/ijms21165862

Table 2.

QTL related to the agronomic characters of the Cheongcheong/Nagdong DH population.

Characteristics Year QTL Chromosome Interval Markers z LOD Additive effect y r 2 x Increasing Effects w
Heading date 2018 qHdd1 1 RM212–RM1297 4.15 −15.0 0.2 Nagdong
qHdd1-1 1 RM11605–RM3530 2.70 −16.1 0.2 Nagdong
2019 qHdd1-2 1 RM212–RM1297 4.20 −11.2 0.2 Nagdong
Culm length 2018 qCl1 1 RM212–RM3411 4.58 −7.2 0.2 Nagdong
qCl1-1 1 RM11605–RM3530 2.70 −5.7 0.2 Nagdong
qCl112 12 RM8216–RM28816 2.95 −6.3 0.2 Nagdong
2019 qCl1-2 1 RM212–RM1297 4.39 −7.7 0.2 Nagdong
Panicle length 2018 qPl1 1 RM212–RM3411 4.24 −2.2 0.3 Nagdong
qPl1-1 1 RM1297–RM3530 2.70 −2.1 0.3 Nagdong
2019 qPl1-2 1 RM212–RM1297 3.97 −2.2 0.2 Nagdong
qPl112 12 RM8216–RM1159 3.12 −2.1 0.2 Nagdong
Number of tillers 2018 qNt1 1 RM212–RM1297 3.45 −0.5 0.2 Nagdong
1000 grain weight 2018 qTgw1 1 RM212–RM11694 3.80 −0.3 0.2 Nagdong
qTgw 12 12 RM8216–RM1159 3.23 −1.2 0.1 Nagdong
2019 qTgw1-1 1 RM212–RM11669 3.78 −0.3 0.2 Nagdong
Content of chlorophyll 2018 qCc1 1 RM3709–RM11669 3.09 −3.3 0.2 Nagdong
qCc1-1 1 RM11605–RM3530 2.98 −4.6 0.3 Nagdong
2019 qCc1-2 1 RM3709-RM11669 2.98 −3.4 0.2 Nagdong
qCc1-3 1 RM11605–RM3530 3.13 −4.4 0.3 Nagdong

Hdd, heading date; Cl, culm length; Pl, panicle length; Nt, number of tillers; Tgw, 1000 grain weight; Cc, content of chlorophyll. z Interval markers are those within the significance threshold on each border of the QTL range. y The proportion of evaluated phenotype variations attributable to a particular QTL was estimated using the coefficient of determination (r2). x Positive values of the additive effect indicate that alleles from Samgang are in the direction of increases in the traits. w Increased allele is the source of the allele causing an increase in the measured trait.