| ZS11 | ZhongShuang11 |
| RNA-Seq | RNA Sequencing |
| FPKM | Fragments Per Kilobase Million |
| TPM | Transcripts Per Million |
| eFP | Electronic Fluorescent Pictograph |
| SRA | Sequence Read Archive |
| NGS | Next-generation sequencing |
| GEO | Gene Expression Omnibus |
| NCBI | National Center for Biotechnology Information |
| EBI | European Bioinformatics Institute |
| HAG | Hours after germination |
| DAF | Days after flowering |
| GO | Gene Ontology |
| SVG | Scalable Vector Graphics |
| WGCNA | Weighted Gene Coexpression Netwoek Analysis |
| PCC | Pearson correlation coefficient |
| BLAST | Basic Local Alignment Search Tool |
| API | Application programming interfaces |